Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm23903-201ENSMUST00000157566 131 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm20648-201ENSMUST00000175815 328 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm20620-201ENSMUST00000177528 168 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm17048-201ENSMUST00000179266 847 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm23186-201ENSMUST00000180078 107 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm37774-201ENSMUST00000194401 245 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm44382-201ENSMUST00000198683 122 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm2602-201ENSMUST00000202112 571 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm3912-203ENSMUST00000211024 367 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm45724-201ENSMUST00000213031 420 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm25586-201ENSMUST00000082499 112 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm24254-201ENSMUST00000083702 104 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm23846-201ENSMUST00000083835 107 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm13835-201ENSMUST00000118459 685 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm7927-201ENSMUST00000118818 880 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm12044-201ENSMUST00000120335 213 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm12396-201ENSMUST00000121600 306 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm15618-201ENSMUST00000121610 452 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm13508-201ENSMUST00000121639 775 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm13555-201ENSMUST00000121668 319 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm12770-201ENSMUST00000121734 462 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm11759-201ENSMUST00000121742 464 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm26346-201ENSMUST00000157525 329 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm25387-201ENSMUST00000157813 132 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Mir7j-201ENSMUST00000184427 122 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm18406-201ENSMUST00000185872 669 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm29519-201ENSMUST00000186994 398 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm28973-201ENSMUST00000189310 613 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm37946-201ENSMUST00000192064 347 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm18407-201ENSMUST00000192126 790 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm43368-201ENSMUST00000200638 409 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm19033-201ENSMUST00000208516 964 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm9088-201ENSMUST00000220237 508 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Clrn1Q8K445 Gm24207-201ENSMUST00000082781 108 ntBASIC5.63□□□□□ -1.51
Clrn1Q8K445 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms