Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm27044-201ENSMUST00000183033 796 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm38122-201ENSMUST00000192679 885 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm36638-201ENSMUST00000193295 400 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm35570-201ENSMUST00000198730 681 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm38670-201ENSMUST00000199248 77 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm43054-201ENSMUST00000199495 884 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm31520-201ENSMUST00000203048 733 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm45700-201ENSMUST00000205866 347 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 AC153975.1-201ENSMUST00000220087 926 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm10064-201ENSMUST00000071235 399 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Brf1Q8CFK2 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm15529-201ENSMUST00000121833 994 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm24773-201ENSMUST00000158513 99 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm17061-201ENSMUST00000163167 499 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm17142-201ENSMUST00000164933 645 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm17223-201ENSMUST00000171413 481 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Mir3097-201ENSMUST00000175356 67 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Mir6417-201ENSMUST00000183815 116 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm18952-201ENSMUST00000194471 846 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.55□□□□□ -1.36
Brf1Q8CFK2 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm15490-201ENSMUST00000119894 387 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm12768-201ENSMUST00000120055 759 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm12313-201ENSMUST00000121347 421 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm15152-201ENSMUST00000121540 394 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm12110-201ENSMUST00000121601 579 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm15795-201ENSMUST00000160969 553 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Gm27033-201ENSMUST00000183226 544 ntBASIC6.54□□□□□ -1.36
Brf1Q8CFK2 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms