Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.2□□□□□ -1.42
Nup88Q8CEC0 AV026068-220ENSMUST00000224153 1147 ntBASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Zfp429-203ENSMUST00000224684 524 ntBASIC6.2□□□□□ -1.42
Nup88Q8CEC0 AV026068-224ENSMUST00000224827 928 ntBASIC6.2□□□□□ -1.42
Nup88Q8CEC0 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup88Q8CEC0 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm7609-204ENSMUST00000161424 461 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm9294-201ENSMUST00000165198 789 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm5946-201ENSMUST00000182340 970 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm18728-201ENSMUST00000186155 753 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm42814-201ENSMUST00000199370 460 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm40692-201ENSMUST00000220411 491 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm20368-201ENSMUST00000220716 301 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Snord59a-201ENSMUST00000082844 74 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm9386-201ENSMUST00000095195 381 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.19□□□□□ -1.42
Nup88Q8CEC0 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.19□□□□□ -1.42
Nup88Q8CEC0 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm2199-201ENSMUST00000119065 874 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm13532-201ENSMUST00000120373 240 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm15530-201ENSMUST00000122206 555 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm13487-201ENSMUST00000122240 864 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm23965-201ENSMUST00000157969 142 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm10319-202ENSMUST00000159439 846 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Mir5103-201ENSMUST00000175111 79 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm18330-201ENSMUST00000199246 547 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm44412-201ENSMUST00000203018 294 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Mir412-201ENSMUST00000083636 80 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Gm44894-201ENSMUST00000205280 2174 ntBASIC6.18□□□□□ -1.42
Nup88Q8CEC0 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms