Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 CT030182.2-201ENSMUST00000223569 620 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 AC139845.2-201ENSMUST00000227504 436 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Mir134-201ENSMUST00000083492 71 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm43027-201ENSMUST00000202906 3691 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 AC140299.2-201ENSMUST00000219546 1969 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm11561-201ENSMUST00000117429 417 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm12850-201ENSMUST00000119210 436 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm13502-201ENSMUST00000121574 684 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm15187-201ENSMUST00000122329 264 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm15790-201ENSMUST00000161109 1251 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm27541-201ENSMUST00000184078 122 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm28683-201ENSMUST00000187134 615 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm28840-205ENSMUST00000189320 615 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm28835-203ENSMUST00000190062 615 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm43582-201ENSMUST00000196149 343 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm43444-201ENSMUST00000198123 291 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm35570-201ENSMUST00000198730 681 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm5418-201ENSMUST00000206932 528 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm18468-201ENSMUST00000207321 369 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm18470-201ENSMUST00000207467 420 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm18465-201ENSMUST00000207468 369 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm18464-201ENSMUST00000207803 420 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm18458-201ENSMUST00000207908 369 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm18461-201ENSMUST00000208421 420 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm36371-201ENSMUST00000209043 1103 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Gm38372-201ENSMUST00000194854 4028 ntBASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
Usp40Q8BWR4 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 AC124426.1-203ENSMUST00000221814 1362 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm25848-201ENSMUST00000116790 144 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm11991-201ENSMUST00000119652 1074 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm9890-201ENSMUST00000171867 537 ntBASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp40Q8BWR4 Mir7006-201ENSMUST00000183624 69 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms