Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm15233-201ENSMUST00000118747 400 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm15812-201ENSMUST00000162331 748 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm22411-201ENSMUST00000175462 126 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm22002-201ENSMUST00000175622 125 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm27030-201ENSMUST00000182551 464 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Mir7072-201ENSMUST00000184542 60 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm38015-201ENSMUST00000193048 188 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm44604-201ENSMUST00000205475 496 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm45485-201ENSMUST00000211229 357 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm6362-201ENSMUST00000217686 836 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm3086-202ENSMUST00000221248 310 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc40Q8BI79 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm11737-201ENSMUST00000118713 468 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm12303-201ENSMUST00000119506 673 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm24719-201ENSMUST00000157520 110 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm23897-201ENSMUST00000158110 158 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm3216-201ENSMUST00000166927 486 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm3141-201ENSMUST00000168726 499 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Mir7220-201ENSMUST00000183978 60 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm2147-201ENSMUST00000193588 639 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm34768-201ENSMUST00000193884 565 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm38360-201ENSMUST00000195130 454 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm44307-201ENSMUST00000204466 764 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Nsa2-203ENSMUST00000225410 974 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm22456-201ENSMUST00000082578 125 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Ccdc40Q8BI79 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm25422-201ENSMUST00000104219 129 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm12281-201ENSMUST00000119536 298 ntBASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.54□□□□□ -1.52
Ccdc40Q8BI79 Gm25152-201ENSMUST00000157117 114 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms