Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm23330-201ENSMUST00000082660 164 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm22043-201ENSMUST00000082993 158 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm15400-201ENSMUST00000118944 601 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm11708-201ENSMUST00000119530 832 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm16053-201ENSMUST00000120511 188 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm13788-201ENSMUST00000120767 601 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm13341-201ENSMUST00000120780 672 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm22985-201ENSMUST00000122754 116 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm24216-201ENSMUST00000158259 117 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm22857-201ENSMUST00000174969 134 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Mir5128-201ENSMUST00000175217 84 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Mir7020-201ENSMUST00000183787 70 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm28467-201ENSMUST00000190981 318 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm38213-201ENSMUST00000193203 173 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm44038-201ENSMUST00000203952 889 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm9278-201ENSMUST00000205508 553 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm19880-201ENSMUST00000207731 318 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm45249-201ENSMUST00000211021 348 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm5649-201ENSMUST00000217918 951 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 AC117656.3-204ENSMUST00000225656 859 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm10064-201ENSMUST00000071235 399 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ubfd1Q78JW9 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Mir711-201ENSMUST00000102188 82 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm12090-201ENSMUST00000118692 758 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm14991-201ENSMUST00000119913 598 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Gm15390-201ENSMUST00000120323 738 ntBASIC5.53□□□□□ -1.52
Ubfd1Q78JW9 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms