Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NipblQ6KCD5 AC158981.2-201ENSMUST00000227565 1537 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm25169-201ENSMUST00000104190 129 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm4845-201ENSMUST00000179202 562 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm38040-201ENSMUST00000193505 225 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm43814-201ENSMUST00000197851 413 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm43629-201ENSMUST00000201782 704 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 AC159886.1-201ENSMUST00000217099 1091 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 AC124420.1-201ENSMUST00000219779 791 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NipblQ6KCD5 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm23686-201ENSMUST00000083241 164 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm26165-201ENSMUST00000083791 138 ntBASIC4.01□□□□□ -1.77
NipblQ6KCD5 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
NipblQ6KCD5 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NipblQ6KCD5 Gm7919-201ENSMUST00000202043 1389 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
NipblQ6KCD5 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 AC118639.1-203ENSMUST00000228425 2016 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm37051-201ENSMUST00000194535 2943 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 Mir546-201ENSMUST00000102105 121 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm22590-201ENSMUST00000104247 128 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm5924-201ENSMUST00000132554 871 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Mir6993-201ENSMUST00000184912 65 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 Gm7721-201ENSMUST00000200446 546 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 AC183268.2-201ENSMUST00000214513 446 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 AC134439.1-201ENSMUST00000220923 600 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Fam35a-206ENSMUST00000228626 3100 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 AC174797.5-201ENSMUST00000225055 1860 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
NipblQ6KCD5 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm14995-201ENSMUST00000117135 391 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Gm23905-201ENSMUST00000157568 109 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm22177-201ENSMUST00000175002 158 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm5777-201ENSMUST00000177265 448 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm27193-201ENSMUST00000184217 586 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm27492-201ENSMUST00000185194 187 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 AC154724.1-201ENSMUST00000225782 821 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
NipblQ6KCD5 n-R5s62-201ENSMUST00000082780 96 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC4□□□□□ -1.77
NipblQ6KCD5 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 Gm18422-202ENSMUST00000203798 2214 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 AC117608.2-201ENSMUST00000224124 1363 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NipblQ6KCD5 AC129208.1-201ENSMUST00000227474 2906 ntBASIC4□□□□□ -1.77
NipblQ6KCD5 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
NipblQ6KCD5 Gm44801-201ENSMUST00000207644 2060 ntBASIC3.99□□□□□ -1.77
NipblQ6KCD5 Gm38451-201ENSMUST00000208329 2646 ntBASIC3.99□□□□□ -1.77
NipblQ6KCD5 Gm37509-201ENSMUST00000194867 3169 ntBASIC3.99□□□□□ -1.77
NipblQ6KCD5 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NipblQ6KCD5 AC151971.5-201ENSMUST00000214422 3254 ntBASIC3.99□□□□□ -1.77
NipblQ6KCD5 Gm43528-201ENSMUST00000199492 1674 ntBASIC3.99□□□□□ -1.77
NipblQ6KCD5 Gm19552-201ENSMUST00000194744 2833 ntBASIC3.99□□□□□ -1.77
NipblQ6KCD5 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NipblQ6KCD5 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms