Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Mir199a-2-201ENSMUST00000093618 110 ntBASIC6.2□□□□□ -1.42
Vps54Q5SPW0 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.2□□□□□ -1.42
Vps54Q5SPW0 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Vps54Q5SPW0 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Vps54Q5SPW0 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Vps54Q5SPW0 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.2□□□□□ -1.42
Vps54Q5SPW0 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Vps54Q5SPW0 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.2□□□□□ -1.42
Vps54Q5SPW0 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm15357-201ENSMUST00000119160 285 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm15786-201ENSMUST00000121079 450 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm15530-201ENSMUST00000122206 555 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm23700-201ENSMUST00000158842 102 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm10087-201ENSMUST00000167650 330 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm20397-201ENSMUST00000174520 362 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm38011-201ENSMUST00000193312 279 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm43724-201ENSMUST00000197516 226 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm43408-201ENSMUST00000198263 440 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm18330-201ENSMUST00000199246 547 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm43895-201ENSMUST00000203219 855 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm44184-201ENSMUST00000204290 132 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 AC121912.1-201ENSMUST00000227525 1201 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm29084-201ENSMUST00000185587 1452 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps54Q5SPW0 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Gm43283-201ENSMUST00000199138 2548 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Gm14086-201ENSMUST00000117152 173 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Gm25861-201ENSMUST00000158251 109 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Gm16125-201ENSMUST00000159003 339 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Mir7012-201ENSMUST00000183900 64 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Gm3213-201ENSMUST00000219296 441 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Gm8672-201ENSMUST00000221200 332 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 CT030238.1-201ENSMUST00000228393 442 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Mir31-201ENSMUST00000083474 106 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.18□□□□□ -1.42
Vps54Q5SPW0 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps54Q5SPW0 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps54Q5SPW0 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps54Q5SPW0 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps54Q5SPW0 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms