Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm22266-201ENSMUST00000104011 138 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm25422-201ENSMUST00000104219 129 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm22592-201ENSMUST00000104242 131 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm7312-201ENSMUST00000118798 469 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm13430-201ENSMUST00000121366 288 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm7973-201ENSMUST00000122107 488 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm3216-201ENSMUST00000166927 486 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm3141-201ENSMUST00000168726 499 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm20239-201ENSMUST00000196610 982 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm6649-201ENSMUST00000199743 1165 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm23330-201ENSMUST00000082660 164 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm26063-201ENSMUST00000083378 107 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.49□□□□□ -1.53
Trim43aQ3TL54 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm23910-201ENSMUST00000104597 132 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm25290-201ENSMUST00000122796 144 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm6542-201ENSMUST00000153606 772 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Mir1970-201ENSMUST00000157839 104 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm23318-201ENSMUST00000158000 108 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm28467-201ENSMUST00000190981 318 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm5285-201ENSMUST00000193089 666 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm6543-201ENSMUST00000197353 808 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm18705-201ENSMUST00000215985 913 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm9269-201ENSMUST00000221661 578 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim43aQ3TL54 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Gm13195-201ENSMUST00000117229 261 ntBASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Gm14220-201ENSMUST00000118114 449 ntBASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Gm12717-201ENSMUST00000118427 983 ntBASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Gm12820-201ENSMUST00000119233 342 ntBASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Gm8061-201ENSMUST00000122380 350 ntBASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Gm22596-201ENSMUST00000157601 316 ntBASIC5.47□□□□□ -1.53
Trim43aQ3TL54 Gm25430-201ENSMUST00000157614 289 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms