Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
Cux1P53564 Gm43283-201ENSMUST00000199138 2548 ntBASIC7.83□□□□□ -1.16
Cux1P53564 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
Cux1P53564 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Cux1P53564 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Cux1P53564 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC7.83□□□□□ -1.16
Cux1P53564 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC7.83□□□□□ -1.16
Cux1P53564 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC7.83□□□□□ -1.16
Cux1P53564 Gm43968-201ENSMUST00000203388 389 ntBASIC7.83□□□□□ -1.16
Cux1P53564 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC7.83□□□□□ -1.16
Cux1P53564 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.83□□□□□ -1.16
Cux1P53564 AV026068-220ENSMUST00000224153 1147 ntBASIC7.83□□□□□ -1.16
Cux1P53564 AV026068-224ENSMUST00000224827 928 ntBASIC7.83□□□□□ -1.16
Cux1P53564 Nsa2-203ENSMUST00000225410 974 ntBASIC7.83□□□□□ -1.16
Cux1P53564 CT956049.1-201ENSMUST00000225671 763 ntBASIC7.83□□□□□ -1.16
Cux1P53564 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Cux1P53564 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Cux1P53564 Gm24031-201ENSMUST00000083930 131 ntBASIC7.83□□□□□ -1.16
Cux1P53564 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Cux1P53564 Xpo7-203ENSMUST00000226448 3663 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Cux1P53564 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Cux1P53564 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Cux1P53564 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Cux1P53564 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Cux1P53564 Gm44144-201ENSMUST00000203683 1960 ntBASIC7.82□□□□□ -1.16
Cux1P53564 AC155167.2-201ENSMUST00000226127 1945 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Cux1P53564 Gm25427-201ENSMUST00000157605 103 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Gm37632-201ENSMUST00000191811 1142 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Gm43350-201ENSMUST00000196382 711 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Gm42496-201ENSMUST00000197976 3241 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC7.82□□□□□ -1.16
Cux1P53564 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC7.82□□□□□ -1.16
Cux1P53564 Gm8719-201ENSMUST00000203602 534 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC7.82□□□□□ -1.16
Cux1P53564 AC125190.2-201ENSMUST00000221160 497 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC7.82□□□□□ -1.16
Cux1P53564 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC7.82□□□□□ -1.16
Cux1P53564 CT030705.1-201ENSMUST00000223971 533 ntBASIC7.82□□□□□ -1.16
Cux1P53564 AC137117.1-201ENSMUST00000226912 441 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.82□□□□□ -1.16
Cux1P53564 Gm24166-201ENSMUST00000082724 135 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Cux1P53564 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Cux1P53564 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Cux1P53564 Gm45324-201ENSMUST00000211193 5638 ntBASIC7.82□□□□□ -1.16
Cux1P53564 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC7.81□□□□□ -1.16
Cux1P53564 AC160029.1-201ENSMUST00000219628 2678 ntBASIC7.81□□□□□ -1.16
Cux1P53564 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cux1P53564 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cux1P53564 CT030159.1-201ENSMUST00000221580 2261 ntBASIC7.81□□□□□ -1.16
Cux1P53564 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC7.81□□□□□ -1.16
Cux1P53564 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cux1P53564 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Cux1P53564 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Cux1P53564 Gm11633-201ENSMUST00000118176 444 ntBASIC7.81□□□□□ -1.16
Cux1P53564 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cux1P53564 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Cux1P53564 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cux1P53564 Gm5372-201ENSMUST00000187540 409 ntBASIC7.81□□□□□ -1.16
Cux1P53564 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC7.81□□□□□ -1.16
Cux1P53564 Gm19617-201ENSMUST00000202977 308 ntBASIC7.81□□□□□ -1.16
Cux1P53564 AC137127.3-201ENSMUST00000213340 349 ntBASIC7.81□□□□□ -1.16
Cux1P53564 Olfr881-201ENSMUST00000074611 948 ntBASIC7.81□□□□□ -1.16
Cux1P53564 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Cux1P53564 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.81□□□□□ -1.16
Cux1P53564 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cux1P53564 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Cux1P53564 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Cux1P53564 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Cux1P53564 AC164092.3-201ENSMUST00000216970 1323 ntBASIC7.8□□□□□ -1.16
Cux1P53564 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Cux1P53564 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cux1P53564 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.8□□□□□ -1.16
Cux1P53564 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Gm23594-201ENSMUST00000104307 134 ntBASIC7.8□□□□□ -1.16
Cux1P53564 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC7.8□□□□□ -1.16
Cux1P53564 CT009600.2-201ENSMUST00000226638 481 ntBASIC7.8□□□□□ -1.16
Cux1P53564 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Cux1P53564 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Gm45129-201ENSMUST00000208444 2224 ntBASIC7.8□□□□□ -1.16
Cux1P53564 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Cux1P53564 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Cux1P53564 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Cux1P53564 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Cux1P53564 Gm37248-201ENSMUST00000193576 3174 ntBASIC7.8□□□□□ -1.16
Cux1P53564 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Cux1P53564 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms