Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm4845-201ENSMUST00000179202 562 ntBASIC6.05□□□□□ -1.44
Shmt1P50431 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Shmt1P50431 Gm25120-201ENSMUST00000180148 79 ntBASIC6.05□□□□□ -1.44
Shmt1P50431 Gm27409-201ENSMUST00000184727 80 ntBASIC6.05□□□□□ -1.44
Shmt1P50431 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Shmt1P50431 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Shmt1P50431 Gm18843-201ENSMUST00000194982 719 ntBASIC6.05□□□□□ -1.44
Shmt1P50431 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.05□□□□□ -1.44
Shmt1P50431 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.05□□□□□ -1.44
Shmt1P50431 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.05□□□□□ -1.44
Shmt1P50431 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.05□□□□□ -1.44
Shmt1P50431 AC154738.2-201ENSMUST00000227403 1110 ntBASIC6.05□□□□□ -1.44
Shmt1P50431 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Shmt1P50431 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Shmt1P50431 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Shmt1P50431 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Shmt1P50431 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Shmt1P50431 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.05□□□□□ -1.44
Shmt1P50431 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Shmt1P50431 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Shmt1P50431 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Shmt1P50431 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.04□□□□□ -1.44
Shmt1P50431 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm12667-201ENSMUST00000118299 1332 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Shmt1P50431 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm14220-201ENSMUST00000118114 449 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Gm16200-201ENSMUST00000120385 331 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Gm14800-201ENSMUST00000122084 1272 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Gm23429-201ENSMUST00000122486 149 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm21909-201ENSMUST00000178260 439 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Gm26968-201ENSMUST00000182894 481 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm2617-201ENSMUST00000185690 1066 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm28467-201ENSMUST00000190981 318 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Gm43148-201ENSMUST00000198237 520 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Gm8209-201ENSMUST00000206386 553 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Gm7990-201ENSMUST00000212126 593 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.04□□□□□ -1.44
Shmt1P50431 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Vmn1r89-206ENSMUST00000227319 985 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm22578-201ENSMUST00000083730 107 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Shmt1P50431 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Shmt1P50431 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Shmt1P50431 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.04□□□□□ -1.44
Shmt1P50431 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Shmt1P50431 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.04□□□□□ -1.44
Shmt1P50431 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Shmt1P50431 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Shmt1P50431 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Shmt1P50431 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Gm14797-201ENSMUST00000119378 1480 ntBASIC6.03□□□□□ -1.44
Shmt1P50431 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.03□□□□□ -1.44
Shmt1P50431 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Shmt1P50431 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Shmt1P50431 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Shmt1P50431 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Shmt1P50431 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.03□□□□□ -1.44
Shmt1P50431 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Shmt1P50431 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Shmt1P50431 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Shmt1P50431 Gm3943-201ENSMUST00000118606 718 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms