Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC5.86□□□□□ -1.47
GdnfP48540 Gm25163-201ENSMUST00000158905 104 ntBASIC5.86□□□□□ -1.47
GdnfP48540 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
GdnfP48540 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC5.86□□□□□ -1.47
GdnfP48540 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
GdnfP48540 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
GdnfP48540 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
GdnfP48540 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.86□□□□□ -1.47
GdnfP48540 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
GdnfP48540 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
GdnfP48540 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
GdnfP48540 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Gm5787-201ENSMUST00000183049 1038 ntBASIC5.86□□□□□ -1.47
GdnfP48540 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC5.86□□□□□ -1.47
GdnfP48540 Gm28149-201ENSMUST00000187102 378 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Gm28768-201ENSMUST00000189034 378 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Gm29369-201ENSMUST00000190674 615 ntBASIC5.86□□□□□ -1.47
GdnfP48540 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.86□□□□□ -1.47
GdnfP48540 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Gm43926-201ENSMUST00000203978 430 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC5.86□□□□□ -1.47
GdnfP48540 Gm8275-201ENSMUST00000219732 424 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Gm46424-201ENSMUST00000221567 168 ntBASIC5.86□□□□□ -1.47
GdnfP48540 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.86□□□□□ -1.47
GdnfP48540 AC154328.1-201ENSMUST00000225875 307 ntBASIC5.86□□□□□ -1.47
GdnfP48540 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.86□□□□□ -1.47
GdnfP48540 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.86□□□□□ -1.47
GdnfP48540 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.86□□□□□ -1.47
GdnfP48540 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
GdnfP48540 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
GdnfP48540 n-R5s29-201ENSMUST00000082836 119 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Gm7731-201ENSMUST00000091759 470 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
GdnfP48540 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
GdnfP48540 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
GdnfP48540 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GdnfP48540 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.86□□□□□ -1.47
GdnfP48540 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.85□□□□□ -1.47
GdnfP48540 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.85□□□□□ -1.47
GdnfP48540 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.85□□□□□ -1.47
GdnfP48540 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Mir683-2-201ENSMUST00000102099 109 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Mir708-201ENSMUST00000102189 109 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm22781-201ENSMUST00000104083 137 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.85□□□□□ -1.47
GdnfP48540 Gm12635-201ENSMUST00000117285 752 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm15105-201ENSMUST00000117777 204 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm14631-201ENSMUST00000119067 594 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm15231-201ENSMUST00000119174 447 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm25806-201ENSMUST00000122782 122 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.85□□□□□ -1.47
GdnfP48540 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC5.85□□□□□ -1.47
GdnfP48540 Gm26349-201ENSMUST00000157530 130 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm24286-201ENSMUST00000157632 128 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm25180-201ENSMUST00000157746 115 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm24228-201ENSMUST00000158829 129 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Mir683-1-201ENSMUST00000179371 109 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm17786-201ENSMUST00000182000 427 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm27428-201ENSMUST00000184289 110 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.85□□□□□ -1.47
GdnfP48540 Gm5261-201ENSMUST00000185860 713 ntBASIC5.85□□□□□ -1.47
GdnfP48540 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 Nras-ps2-201ENSMUST00000195269 178 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm43147-201ENSMUST00000196944 542 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm43157-201ENSMUST00000198223 412 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Gm44984-201ENSMUST00000207802 394 ntBASIC5.85□□□□□ -1.47
GdnfP48540 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
GdnfP48540 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GdnfP48540 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.85□□□□□ -1.47
GdnfP48540 AC122539.1-201ENSMUST00000219925 329 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms