Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cxcl12P40224 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Cxcl12P40224 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cxcl12P40224 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.37□□□□□ -1.55
Cxcl12P40224 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Cxcl12P40224 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.37□□□□□ -1.55
Cxcl12P40224 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cxcl12P40224 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cxcl12P40224 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.37□□□□□ -1.55
Cxcl12P40224 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cxcl12P40224 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.37□□□□□ -1.55
Cxcl12P40224 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cxcl12P40224 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cxcl12P40224 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cxcl12P40224 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cxcl12P40224 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm25726-201ENSMUST00000104529 129 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm12112-201ENSMUST00000117772 231 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm25292-201ENSMUST00000122797 322 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm6155-201ENSMUST00000173735 341 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm21909-201ENSMUST00000178260 439 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm22367-201ENSMUST00000178930 132 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm27193-201ENSMUST00000184217 586 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm21856-201ENSMUST00000187547 696 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm42776-201ENSMUST00000198031 406 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm19617-201ENSMUST00000202977 308 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm18601-201ENSMUST00000220831 634 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cxcl12P40224 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cxcl12P40224 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.36□□□□□ -1.55
Cxcl12P40224 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cxcl12P40224 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cxcl12P40224 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cxcl12P40224 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cxcl12P40224 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cxcl12P40224 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cxcl12P40224 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cxcl12P40224 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cxcl12P40224 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm15333-201ENSMUST00000118825 364 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm15828-201ENSMUST00000119911 522 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm13367-201ENSMUST00000119955 796 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm13745-201ENSMUST00000121994 527 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm23673-201ENSMUST00000157474 298 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Scarna10-201ENSMUST00000158992 325 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm18352-201ENSMUST00000189113 902 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm8599-201ENSMUST00000193033 457 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm37088-201ENSMUST00000193887 406 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cxcl12P40224 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.35□□□□□ -1.55
Cxcl12P40224 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.35□□□□□ -1.55
Cxcl12P40224 Gm7040-201ENSMUST00000223271 443 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cxcl12P40224 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cxcl12P40224 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.35□□□□□ -1.55
Cxcl12P40224 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cxcl12P40224 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms