Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC4.11□□□□□ -1.75
Hmgb3O54879 Gm2645-201ENSMUST00000223516 547 ntBASIC4.11□□□□□ -1.75
Hmgb3O54879 AC154618.2-201ENSMUST00000228299 452 ntBASIC4.11□□□□□ -1.75
Hmgb3O54879 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Hmgb3O54879 Mir338-201ENSMUST00000083666 98 ntBASIC4.11□□□□□ -1.75
Hmgb3O54879 Mir375-201ENSMUST00000083682 64 ntBASIC4.11□□□□□ -1.75
Hmgb3O54879 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Hmgb3O54879 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Hmgb3O54879 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Hmgb3O54879 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Hmgb3O54879 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Hmgb3O54879 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.11□□□□□ -1.75
Hmgb3O54879 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.11□□□□□ -1.75
Hmgb3O54879 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.11□□□□□ -1.75
Hmgb3O54879 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Hmgb3O54879 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC4.11□□□□□ -1.75
Hmgb3O54879 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Hmgb3O54879 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Hmgb3O54879 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm13428-201ENSMUST00000117540 365 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm13259-201ENSMUST00000120792 456 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm18828-202ENSMUST00000181035 310 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Ighv1-73-201ENSMUST00000197435 352 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm43203-201ENSMUST00000200130 558 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 AC119894.1-201ENSMUST00000220399 350 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm43062-201ENSMUST00000196302 1319 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hmgb3O54879 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Hmgb3O54879 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hmgb3O54879 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hmgb3O54879 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm22266-201ENSMUST00000104011 138 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm14930-201ENSMUST00000118864 652 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm12704-201ENSMUST00000119789 464 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm6542-201ENSMUST00000153606 772 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm22596-201ENSMUST00000157601 316 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm23121-201ENSMUST00000157653 173 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hmgb3O54879 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Ighv1-29-201ENSMUST00000194116 342 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm42753-201ENSMUST00000196718 1268 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm44374-201ENSMUST00000199821 140 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm45157-201ENSMUST00000208729 401 ntBASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Hmgb3O54879 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC4.09□□□□□ -1.75
Hmgb3O54879 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.09□□□□□ -1.75
Hmgb3O54879 AC122295.1-201ENSMUST00000223476 388 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms