Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm17711-201ENSMUST00000172028 237 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm8941-201ENSMUST00000181451 899 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm27754-201ENSMUST00000183340 126 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm27225-201ENSMUST00000183833 557 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm27781-201ENSMUST00000185185 92 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm28467-201ENSMUST00000190981 318 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm6366-201ENSMUST00000198766 826 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm44307-201ENSMUST00000204466 764 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm4374-201ENSMUST00000204929 424 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm44607-201ENSMUST00000205611 1090 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm45185-201ENSMUST00000207556 404 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm36501-201ENSMUST00000221857 745 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm25682-201ENSMUST00000083942 164 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Trim3Q9R1R2 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim3Q9R1R2 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim3Q9R1R2 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim3Q9R1R2 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm42860-201ENSMUST00000196492 3991 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm15421-202ENSMUST00000118224 399 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm23883-201ENSMUST00000122686 290 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm23211-201ENSMUST00000122717 308 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm23082-201ENSMUST00000157852 133 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm24940-201ENSMUST00000158326 108 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm22411-201ENSMUST00000175462 126 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm22002-201ENSMUST00000175622 125 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm27985-201ENSMUST00000185112 378 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm18348-201ENSMUST00000191227 820 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm6543-201ENSMUST00000197353 808 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm43717-201ENSMUST00000198684 310 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim3Q9R1R2 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm44214-201ENSMUST00000204153 606 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm8319-201ENSMUST00000205708 641 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm45777-201ENSMUST00000213009 301 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 AC112956.1-201ENSMUST00000213563 492 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm18541-201ENSMUST00000215935 538 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 AC142113.2-201ENSMUST00000217425 748 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 AC124356.2-201ENSMUST00000221874 336 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 AC161884.2-201ENSMUST00000224513 227 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 AC154583.1-201ENSMUST00000224788 655 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 AC160980.2-201ENSMUST00000225131 949 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim3Q9R1R2 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim3Q9R1R2 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim3Q9R1R2 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5□□□□□ -1.61
Trim3Q9R1R2 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
Trim3Q9R1R2 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm19136-201ENSMUST00000190706 2067 ntBASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim3Q9R1R2 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim3Q9R1R2 Gm44751-201ENSMUST00000208302 4387 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms