Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm26993-201ENSMUST00000182766 789 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm20561-201ENSMUST00000188131 292 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm43054-201ENSMUST00000199495 884 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm18705-201ENSMUST00000215985 913 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm9202-201ENSMUST00000223036 437 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm6134-201ENSMUST00000117265 171 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm12717-201ENSMUST00000118427 983 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm13172-201ENSMUST00000118685 256 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm15012-201ENSMUST00000119176 106 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm12704-201ENSMUST00000119789 464 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm11825-201ENSMUST00000120710 736 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm14876-201ENSMUST00000120795 327 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm5699-201ENSMUST00000152491 723 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm25714-201ENSMUST00000158626 296 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm4134-201ENSMUST00000173244 563 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm27688-201ENSMUST00000183634 91 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm5285-201ENSMUST00000193089 666 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm7688-201ENSMUST00000212857 337 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm6906-201ENSMUST00000218014 569 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm23508-201ENSMUST00000083079 72 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Lima1Q9ERG0 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm22266-201ENSMUST00000104011 138 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm14220-201ENSMUST00000118114 449 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm12820-201ENSMUST00000119233 342 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm9208-201ENSMUST00000120468 948 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm6542-201ENSMUST00000153606 772 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm26404-201ENSMUST00000158498 109 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm2325-201ENSMUST00000186637 581 ntBASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.01□□□□□ -1.61
Lima1Q9ERG0 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms