Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm28468-201ENSMUST00000188536 615 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm18482-201ENSMUST00000202405 760 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm4587-201ENSMUST00000209135 637 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm33601-201ENSMUST00000210001 961 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm18904-201ENSMUST00000218756 329 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Clec2j-201ENSMUST00000032517 515 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Mir412-201ENSMUST00000083636 80 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rpa3Q9CQ71 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm11486-201ENSMUST00000107322 478 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm12677-201ENSMUST00000118668 426 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm23837-201ENSMUST00000122656 286 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm22895-201ENSMUST00000157508 308 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm42459-201ENSMUST00000199679 742 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Rpa3Q9CQ71 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Rpa3Q9CQ71 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.4□□□□□ -1.55
Rpa3Q9CQ71 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.4□□□□□ -1.55
Rpa3Q9CQ71 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Rpa3Q9CQ71 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Rpa3Q9CQ71 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Rpa3Q9CQ71 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Rpa3Q9CQ71 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm11912-201ENSMUST00000117235 264 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm13024-201ENSMUST00000121756 718 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm22725-201ENSMUST00000158092 110 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm22326-201ENSMUST00000158897 351 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm6047-201ENSMUST00000167221 574 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm29813-201ENSMUST00000195856 447 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm42437-201ENSMUST00000197263 923 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm44221-201ENSMUST00000203552 388 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm4012-201ENSMUST00000221504 581 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.39□□□□□ -1.55
Rpa3Q9CQ71 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms