Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm21815-201ENSMUST00000178213 664 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm37098-201ENSMUST00000192290 244 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm8860-201ENSMUST00000193160 445 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm20128-201ENSMUST00000196189 417 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm20789-201ENSMUST00000221002 4195 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm14367-201ENSMUST00000119214 1497 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm18422-202ENSMUST00000203798 2214 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm42520-201ENSMUST00000199642 1502 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm38257-201ENSMUST00000195881 2761 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm42503-201ENSMUST00000199080 3706 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm25647-201ENSMUST00000101832 78 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm25823-201ENSMUST00000101995 78 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm22091-201ENSMUST00000116908 127 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm15175-201ENSMUST00000117629 132 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm15021-201ENSMUST00000117832 742 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm22199-201ENSMUST00000122660 126 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm24438-201ENSMUST00000157893 115 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm22548-201ENSMUST00000174899 78 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm24220-201ENSMUST00000177753 79 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm25988-201ENSMUST00000177759 79 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm23471-201ENSMUST00000177886 79 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm26488-201ENSMUST00000178225 79 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm23449-201ENSMUST00000179208 79 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm25221-201ENSMUST00000180051 79 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm8392-201ENSMUST00000185647 835 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm28507-201ENSMUST00000189737 703 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Vmn1r82-202ENSMUST00000191002 918 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm37715-201ENSMUST00000193206 235 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm37111-201ENSMUST00000193250 634 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm36638-201ENSMUST00000193295 400 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm42958-201ENSMUST00000197595 318 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm17824-201ENSMUST00000197690 805 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm18863-201ENSMUST00000217004 1299 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm9267-201ENSMUST00000222831 404 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 CT573085.1-201ENSMUST00000224279 1197 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 AC129219.1-201ENSMUST00000224336 448 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 AC167140.1-201ENSMUST00000224710 403 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Dnm3os-201ENSMUST00000139662 7928 ntBASIC7.15□□□□□ -1.26
Trim11Q99PQ2 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim11Q99PQ2 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms