Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm4832-201ENSMUST00000182679 399 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Mir703-201ENSMUST00000197105 109 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Gm18611-201ENSMUST00000200334 1118 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 Gm43456-201ENSMUST00000202519 457 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 Gm4374-201ENSMUST00000204929 424 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 Gm10709-201ENSMUST00000213318 480 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Gm6477-201ENSMUST00000217098 764 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 Gm19181-201ENSMUST00000218891 940 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Msh4Q99MT2 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Gm18247-201ENSMUST00000222937 601 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 AC162934.3-201ENSMUST00000223015 841 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.42□□□□□ -1.54
Msh4Q99MT2 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msh4Q99MT2 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm23942-201ENSMUST00000101956 107 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm11970-201ENSMUST00000116105 320 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm12850-201ENSMUST00000119210 436 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm13245-201ENSMUST00000119646 260 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm12768-201ENSMUST00000120055 759 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm11761-201ENSMUST00000121392 445 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Snora81-201ENSMUST00000157310 178 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm24960-201ENSMUST00000157923 90 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm16139-201ENSMUST00000160015 420 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm6808-201ENSMUST00000162341 807 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Mir1264-201ENSMUST00000175381 86 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Mir7674-201ENSMUST00000184964 63 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm20940-201ENSMUST00000197308 360 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Mir219c-201ENSMUST00000199860 60 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Clec2j-202ENSMUST00000203658 606 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm5735-201ENSMUST00000207053 167 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm45474-201ENSMUST00000209471 408 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm20786-201ENSMUST00000212649 436 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm19233-201ENSMUST00000219772 936 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm3800-201ENSMUST00000221086 554 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 AC133654.1-201ENSMUST00000228411 672 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm22575-201ENSMUST00000082981 110 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm23795-201ENSMUST00000084006 137 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm22444-201ENSMUST00000093693 108 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msh4Q99MT2 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Msh4Q99MT2 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.41□□□□□ -1.54
Msh4Q99MT2 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms