Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.66□□□□□ -1.5
Clrn1Q8K445 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Clrn1Q8K445 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Clrn1Q8K445 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm11484-201ENSMUST00000119808 338 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm6067-201ENSMUST00000121648 491 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm25117-201ENSMUST00000157194 144 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm22311-201ENSMUST00000158006 110 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm17121-201ENSMUST00000170414 847 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm25065-201ENSMUST00000177914 132 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm25891-201ENSMUST00000180050 132 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm17222-201ENSMUST00000180135 847 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm29259-201ENSMUST00000186396 694 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm29600-201ENSMUST00000188687 377 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm37191-201ENSMUST00000193346 388 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm3351-201ENSMUST00000193454 505 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm37358-201ENSMUST00000195492 479 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm44431-201ENSMUST00000203500 413 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm5886-202ENSMUST00000203957 522 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 CT030175.1-201ENSMUST00000220822 408 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 CT010480.5-201ENSMUST00000225026 217 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 AC121960.3-201ENSMUST00000227077 623 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gm8256-203ENSMUST00000228692 591 ntBASIC5.65□□□□□ -1.5
Clrn1Q8K445 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Clrn1Q8K445 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Clrn1Q8K445 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Clrn1Q8K445 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.65□□□□□ -1.51
Clrn1Q8K445 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Clrn1Q8K445 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.65□□□□□ -1.51
Clrn1Q8K445 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Clrn1Q8K445 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.65□□□□□ -1.51
Clrn1Q8K445 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
Clrn1Q8K445 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Clrn1Q8K445 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Clrn1Q8K445 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.65□□□□□ -1.51
Clrn1Q8K445 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.65□□□□□ -1.51
Clrn1Q8K445 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm8700-201ENSMUST00000222187 3054 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Clrn1Q8K445 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm12131-201ENSMUST00000117479 359 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm11833-201ENSMUST00000118393 853 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm11420-201ENSMUST00000120047 402 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm13493-201ENSMUST00000120318 493 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Mir1900-201ENSMUST00000122714 78 ntBASIC5.64□□□□□ -1.51
Clrn1Q8K445 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms