Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Gm42694-201ENSMUST00000196951 358 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Gm18011-201ENSMUST00000203717 565 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Gm44623-201ENSMUST00000207934 434 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Gm8911-201ENSMUST00000213986 652 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lrif1Q8CDD9 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm25919-201ENSMUST00000104271 132 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Mir466j-201ENSMUST00000116876 122 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm13195-201ENSMUST00000117229 261 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm26489-201ENSMUST00000157880 264 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm23318-201ENSMUST00000158000 108 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm29161-201ENSMUST00000188250 699 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm19231-201ENSMUST00000193212 830 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm6543-201ENSMUST00000197353 808 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm6261-201ENSMUST00000204707 760 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm23330-201ENSMUST00000082660 164 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.14□□□□□ -1.59
Lrif1Q8CDD9 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm14521-201ENSMUST00000119545 350 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm15057-201ENSMUST00000121516 534 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm21803-201ENSMUST00000188897 693 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm44074-201ENSMUST00000204562 337 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm8039-201ENSMUST00000204758 712 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm4374-201ENSMUST00000204929 424 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm44683-201ENSMUST00000209088 484 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.13□□□□□ -1.59
Lrif1Q8CDD9 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms