Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Gm16456-201ENSMUST00000174431 920 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Gm29509-201ENSMUST00000185716 321 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Gm45343-201ENSMUST00000210452 828 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
Trub1Q8C0D0 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm15357-201ENSMUST00000119160 285 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm22895-201ENSMUST00000157508 308 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm22261-201ENSMUST00000158691 324 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm22326-201ENSMUST00000158897 351 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm9027-201ENSMUST00000165914 661 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm4831-201ENSMUST00000174626 594 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm44370-201ENSMUST00000175436 112 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm26731-201ENSMUST00000180683 543 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm28468-201ENSMUST00000188536 615 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm28467-201ENSMUST00000190981 318 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm34176-201ENSMUST00000192621 474 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm9442-201ENSMUST00000194242 319 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm18924-201ENSMUST00000211929 316 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm24525-201ENSMUST00000082917 151 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Trub1Q8C0D0 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm12039-201ENSMUST00000118219 180 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm12650-201ENSMUST00000121966 258 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm26490-201ENSMUST00000157879 140 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm28017-201ENSMUST00000183434 126 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm37659-201ENSMUST00000194574 111 ntBASIC5.22□□□□□ -1.57
Trub1Q8C0D0 Gm7721-201ENSMUST00000200446 546 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms