Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC124516.1-201ENSMUST00000221845 3544 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Usp40Q8BWR4 AL591843.1-201ENSMUST00000223686 3082 ntBASIC7.64□□□□□ -1.19
Usp40Q8BWR4 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 AC121942.1-201ENSMUST00000224459 2891 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm7869-201ENSMUST00000121457 1322 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm1966-201ENSMUST00000184540 7293 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm11854-201ENSMUST00000117839 446 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm7670-201ENSMUST00000121272 641 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm15488-201ENSMUST00000121682 670 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm23631-201ENSMUST00000175291 123 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm29474-201ENSMUST00000187688 379 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm7897-201ENSMUST00000193981 554 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Ighv1-35-201ENSMUST00000195265 351 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Trav12-4-201ENSMUST00000200663 271 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm38062-201ENSMUST00000192541 1856 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Usp40Q8BWR4 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Gm4011-201ENSMUST00000174657 2555 ntBASIC7.63□□□□□ -1.19
Usp40Q8BWR4 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 AC164297.4-201ENSMUST00000224225 1307 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm21122-201ENSMUST00000191548 3452 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm14945-201ENSMUST00000119556 1118 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm14065-201ENSMUST00000120848 585 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Mup-ps22-201ENSMUST00000121611 243 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm13007-201ENSMUST00000121866 365 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm23546-201ENSMUST00000158211 137 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm24498-201ENSMUST00000158445 102 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm20545-201ENSMUST00000174739 210 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm21241-201ENSMUST00000179551 934 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm20871-201ENSMUST00000191322 931 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm37421-201ENSMUST00000193088 132 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm43841-201ENSMUST00000199491 586 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm45156-201ENSMUST00000207255 439 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm44961-201ENSMUST00000207450 196 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 Gm18205-201ENSMUST00000209215 841 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 CT025665.1-201ENSMUST00000215251 1199 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 AC134537.2-201ENSMUST00000217770 575 ntBASIC7.62□□□□□ -1.19
Usp40Q8BWR4 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC7.62□□□□□ -1.19
Usp40Q8BWR4 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms