Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm15159-201ENSMUST00000117062 764 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm24754-201ENSMUST00000177997 107 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm25120-201ENSMUST00000180148 79 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm29159-201ENSMUST00000187969 379 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm29288-201ENSMUST00000191582 901 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm17967-201ENSMUST00000195319 647 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm42522-201ENSMUST00000196071 255 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm8039-201ENSMUST00000204758 712 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm45874-201ENSMUST00000212423 346 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 AL929265.1-201ENSMUST00000213427 125 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm6056-201ENSMUST00000221253 488 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm36501-201ENSMUST00000221857 745 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm6104-201ENSMUST00000078030 603 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Mir331-201ENSMUST00000083673 96 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.56□□□□□ -1.52
Ubfd1Q78JW9 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm14521-201ENSMUST00000119545 350 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm16200-201ENSMUST00000120385 331 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm13533-201ENSMUST00000121104 177 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm6175-201ENSMUST00000121351 400 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm23250-201ENSMUST00000157444 267 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm23774-201ENSMUST00000158990 131 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm17194-201ENSMUST00000164610 348 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm17511-201ENSMUST00000172206 342 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Mir6971-201ENSMUST00000183497 63 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm37098-201ENSMUST00000192290 244 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm19231-201ENSMUST00000193212 830 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm20770-201ENSMUST00000193474 694 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Gm44023-201ENSMUST00000203710 469 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ubfd1Q78JW9 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms