Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm11212-201ENSMUST00000118337 618 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm13579-201ENSMUST00000118519 517 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm3943-201ENSMUST00000118606 718 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm11742-201ENSMUST00000119903 233 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm13787-201ENSMUST00000120422 168 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm12267-201ENSMUST00000121609 761 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm23250-201ENSMUST00000157444 267 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm25907-201ENSMUST00000158486 125 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm27688-201ENSMUST00000183634 91 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm2325-201ENSMUST00000186637 581 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm6137-201ENSMUST00000187552 578 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm29159-201ENSMUST00000187969 379 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm45026-201ENSMUST00000205292 833 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm45700-201ENSMUST00000205866 347 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm3257-201ENSMUST00000207217 675 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Mir290a-201ENSMUST00000104627 83 ntBASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm6134-201ENSMUST00000117265 171 ntBASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm22361-201ENSMUST00000158435 176 ntBASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Mir7222-201ENSMUST00000183740 75 ntBASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm42663-201ENSMUST00000199883 351 ntBASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm35648-201ENSMUST00000202304 475 ntBASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm25134-201ENSMUST00000082646 160 ntBASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm23508-201ENSMUST00000083079 72 ntBASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gm23456-201ENSMUST00000083335 137 ntBASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim43aQ3TL54 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Trim43aQ3TL54 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms