Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm18427-201ENSMUST00000195422 515 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm43431-201ENSMUST00000198577 340 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm19033-201ENSMUST00000208516 964 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm24454-201ENSMUST00000083349 132 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.69□□□□□ -1.5
Usp39Q3TIX9 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Usp39Q3TIX9 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm6982-201ENSMUST00000118752 1560 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm42671-201ENSMUST00000198013 1604 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm14931-201ENSMUST00000111079 253 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Mir669d-2-201ENSMUST00000116854 86 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm15159-201ENSMUST00000117062 764 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm14786-201ENSMUST00000117127 944 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm13770-201ENSMUST00000117149 305 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm15176-201ENSMUST00000117734 135 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm14607-201ENSMUST00000119119 491 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm4725-201ENSMUST00000151048 587 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm24002-201ENSMUST00000158456 104 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm15257-201ENSMUST00000177680 883 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm15252-201ENSMUST00000177750 883 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm21756-201ENSMUST00000178380 930 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm6223-201ENSMUST00000178436 871 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm21405-201ENSMUST00000179024 930 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm15260-201ENSMUST00000179402 883 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm28637-201ENSMUST00000179424 345 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm21191-201ENSMUST00000186484 930 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm28594-201ENSMUST00000187022 661 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm21489-201ENSMUST00000189668 818 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm29503-201ENSMUST00000191044 930 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm42776-201ENSMUST00000198031 406 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Mir6906-201ENSMUST00000198998 58 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm44727-201ENSMUST00000204225 451 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm10095-201ENSMUST00000222765 483 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 AC144628.1-201ENSMUST00000227943 466 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm24200-201ENSMUST00000082955 157 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Gm24029-201ENSMUST00000083928 143 ntBASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp39Q3TIX9 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms