Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Snord65-201ENSMUST00000104269 72 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm13755-201ENSMUST00000118509 305 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm11866-201ENSMUST00000120209 335 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm12482-201ENSMUST00000120435 630 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm26372-201ENSMUST00000157831 236 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm23224-201ENSMUST00000158122 271 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Mir3095-201ENSMUST00000175552 87 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm27266-201ENSMUST00000184521 123 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm44307-201ENSMUST00000204466 764 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm44603-201ENSMUST00000206820 367 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm45750-201ENSMUST00000211966 354 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm18789-201ENSMUST00000216115 550 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ptchd3Q0EEE2 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm11781-201ENSMUST00000118328 472 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm12303-201ENSMUST00000119506 673 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm23774-201ENSMUST00000158990 131 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Mir6921-201ENSMUST00000183719 80 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Mir7072-201ENSMUST00000184542 60 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm18529-201ENSMUST00000193025 1257 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm3213-201ENSMUST00000219296 441 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm22807-201ENSMUST00000082737 129 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.07□□□□□ -1.6
Ptchd3Q0EEE2 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Ptchd3Q0EEE2 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ptchd3Q0EEE2 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.06□□□□□ -1.6
Ptchd3Q0EEE2 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ptchd3Q0EEE2 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms