Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col8a1Q00780 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.43□□□□□ -1.54
Col8a1Q00780 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm37078-201ENSMUST00000193314 2009 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 AC129085.2-201ENSMUST00000223763 2800 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 AC138765.2-202ENSMUST00000228418 3435 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm2348-201ENSMUST00000108782 300 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm11488-201ENSMUST00000117277 863 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm13137-201ENSMUST00000118035 345 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm11322-201ENSMUST00000118095 435 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm2199-201ENSMUST00000119065 874 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm12873-201ENSMUST00000119988 422 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm12181-201ENSMUST00000121448 531 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm22724-201ENSMUST00000158091 127 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm17154-201ENSMUST00000165748 431 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm27853-201ENSMUST00000184176 250 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm28343-201ENSMUST00000185386 112 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm2325-201ENSMUST00000186637 581 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm18185-201ENSMUST00000186725 667 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm6137-201ENSMUST00000187552 578 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm9541-201ENSMUST00000188409 502 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm20932-201ENSMUST00000189115 694 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm19694-201ENSMUST00000192364 505 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm36638-201ENSMUST00000193295 400 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm37358-201ENSMUST00000195492 479 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm7825-201ENSMUST00000204046 416 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm44768-201ENSMUST00000205719 393 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm30694-201ENSMUST00000209278 1230 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm9535-201ENSMUST00000218499 768 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm18405-201ENSMUST00000220743 511 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm5436-201ENSMUST00000058103 643 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm23242-201ENSMUST00000083055 107 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Gm24522-201ENSMUST00000083964 108 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col8a1Q00780 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.42□□□□□ -1.54
Col8a1Q00780 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col8a1Q00780 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC5.41□□□□□ -1.54
Col8a1Q00780 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col8a1Q00780 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms