Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm21041-201ENSMUST00000214829 823 ntBASIC5.86□□□□□ -1.47
CiitaP79621 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CiitaP79621 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CiitaP79621 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.86□□□□□ -1.47
CiitaP79621 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.86□□□□□ -1.47
CiitaP79621 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.86□□□□□ -1.47
CiitaP79621 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CiitaP79621 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.86□□□□□ -1.47
CiitaP79621 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CiitaP79621 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CiitaP79621 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CiitaP79621 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CiitaP79621 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CiitaP79621 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CiitaP79621 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
CiitaP79621 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
CiitaP79621 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CiitaP79621 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm24350-201ENSMUST00000104163 133 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm7670-201ENSMUST00000121272 641 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.85□□□□□ -1.47
CiitaP79621 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Gm11507-201ENSMUST00000156462 412 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm24186-201ENSMUST00000157983 127 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm25432-201ENSMUST00000158284 66 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm24860-201ENSMUST00000158457 276 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm22261-201ENSMUST00000158691 324 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Scarna10-201ENSMUST00000158992 325 ntBASIC5.85□□□□□ -1.47
CiitaP79621 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Gm8321-201ENSMUST00000181691 980 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.85□□□□□ -1.47
CiitaP79621 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.85□□□□□ -1.47
CiitaP79621 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.85□□□□□ -1.47
CiitaP79621 Gm37882-201ENSMUST00000195254 196 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm44869-201ENSMUST00000208836 357 ntBASIC5.85□□□□□ -1.47
CiitaP79621 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.85□□□□□ -1.47
CiitaP79621 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.85□□□□□ -1.47
CiitaP79621 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Gm22456-201ENSMUST00000082578 125 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm24207-201ENSMUST00000082781 108 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Gm25139-201ENSMUST00000083247 210 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CiitaP79621 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CiitaP79621 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CiitaP79621 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.85□□□□□ -1.47
CiitaP79621 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CiitaP79621 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.85□□□□□ -1.47
CiitaP79621 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CiitaP79621 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CiitaP79621 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CiitaP79621 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CiitaP79621 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CiitaP79621 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CiitaP79621 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CiitaP79621 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CiitaP79621 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CiitaP79621 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.84□□□□□ -1.47
CiitaP79621 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.84□□□□□ -1.47
CiitaP79621 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CiitaP79621 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.84□□□□□ -1.47
CiitaP79621 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CiitaP79621 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CiitaP79621 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CiitaP79621 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CiitaP79621 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Gm44456-201ENSMUST00000196554 89 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Gm18325-201ENSMUST00000203228 835 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Gm7825-201ENSMUST00000204046 416 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Gm44277-201ENSMUST00000205128 649 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Gm45215-201ENSMUST00000206407 395 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.84□□□□□ -1.47
CiitaP79621 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.84□□□□□ -1.47
CiitaP79621 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC5.84□□□□□ -1.47
CiitaP79621 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CiitaP79621 Gm6049-201ENSMUST00000222369 458 ntBASIC5.84□□□□□ -1.47
CiitaP79621 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
CiitaP79621 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms