Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm23837-201ENSMUST00000122656 286 ntBASIC7.87□□□□□ -1.15
Cux1P53564 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Cux1P53564 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC7.87□□□□□ -1.15
Cux1P53564 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC7.87□□□□□ -1.15
Cux1P53564 Gm24444-201ENSMUST00000157244 308 ntBASIC7.87□□□□□ -1.15
Cux1P53564 Gm17081-201ENSMUST00000167363 478 ntBASIC7.87□□□□□ -1.15
Cux1P53564 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Cux1P53564 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Cux1P53564 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC7.87□□□□□ -1.15
Cux1P53564 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC7.87□□□□□ -1.15
Cux1P53564 AC146601.1-201ENSMUST00000227910 905 ntBASIC7.87□□□□□ -1.15
Cux1P53564 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Cux1P53564 Gm43490-201ENSMUST00000197593 2652 ntBASIC7.87□□□□□ -1.15
Cux1P53564 Gm45183-201ENSMUST00000207937 1497 ntBASIC7.86□□□□□ -1.15
Cux1P53564 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC7.86□□□□□ -1.15
Cux1P53564 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Cux1P53564 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Cux1P53564 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Cux1P53564 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Cux1P53564 Gm24124-201ENSMUST00000104103 132 ntBASIC7.86□□□□□ -1.15
Cux1P53564 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Cux1P53564 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Cux1P53564 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC7.86□□□□□ -1.15
Cux1P53564 Gm37961-201ENSMUST00000192729 299 ntBASIC7.86□□□□□ -1.15
Cux1P53564 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC7.86□□□□□ -1.15
Cux1P53564 Gm45608-201ENSMUST00000210948 389 ntBASIC7.86□□□□□ -1.15
Cux1P53564 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Cux1P53564 Desi2-202ENSMUST00000069568 1193 ntBASIC7.86□□□□□ -1.15
Cux1P53564 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Cux1P53564 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Cux1P53564 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Cux1P53564 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Cux1P53564 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Cux1P53564 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Cux1P53564 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC7.85□□□□□ -1.15
Cux1P53564 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Cux1P53564 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Cux1P53564 Gm14985-201ENSMUST00000118693 786 ntBASIC7.85□□□□□ -1.15
Cux1P53564 Gm14732-201ENSMUST00000121372 545 ntBASIC7.85□□□□□ -1.15
Cux1P53564 Magea9-ps-201ENSMUST00000140655 732 ntBASIC7.85□□□□□ -1.15
Cux1P53564 Magea9-ps-202ENSMUST00000167328 899 ntBASIC7.85□□□□□ -1.15
Cux1P53564 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC7.85□□□□□ -1.15
Cux1P53564 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC7.85□□□□□ -1.15
Cux1P53564 Gm6366-201ENSMUST00000198766 826 ntBASIC7.85□□□□□ -1.15
Cux1P53564 Gm45070-201ENSMUST00000208100 246 ntBASIC7.85□□□□□ -1.15
Cux1P53564 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC7.85□□□□□ -1.15
Cux1P53564 CT025689.2-201ENSMUST00000224979 429 ntBASIC7.85□□□□□ -1.15
Cux1P53564 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Cux1P53564 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Cux1P53564 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Cux1P53564 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Cux1P53564 Gm43891-201ENSMUST00000205132 3112 ntBASIC7.85□□□□□ -1.15
Cux1P53564 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Cux1P53564 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Cux1P53564 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
Cux1P53564 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Cux1P53564 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC7.84□□□□□ -1.15
Cux1P53564 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC7.84□□□□□ -1.15
Cux1P53564 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Cux1P53564 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC7.84□□□□□ -1.15
Cux1P53564 Gm16571-201ENSMUST00000159112 291 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Gm15796-201ENSMUST00000162135 204 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Gm16456-201ENSMUST00000174431 920 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Gm8614-201ENSMUST00000182528 978 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Gm17999-201ENSMUST00000211568 542 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Gm18601-201ENSMUST00000220831 634 ntBASIC7.84□□□□□ -1.15
Cux1P53564 AC156569.1-201ENSMUST00000222020 3841 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Cux1P53564 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Cux1P53564 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Cux1P53564 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Cux1P53564 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Cux1P53564 Gm37775-201ENSMUST00000194120 2313 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Gm3978-201ENSMUST00000163406 2512 ntBASIC7.84□□□□□ -1.15
Cux1P53564 Gm44739-201ENSMUST00000205294 1426 ntBASIC7.84□□□□□ -1.15
Cux1P53564 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC7.84□□□□□ -1.15
Cux1P53564 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Cux1P53564 Gm6503-201ENSMUST00000210829 2225 ntBASIC7.84□□□□□ -1.15
Cux1P53564 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC7.84□□□□□ -1.15
Cux1P53564 Gm18757-201ENSMUST00000207938 3141 ntBASIC7.84□□□□□ -1.16
Cux1P53564 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Cux1P53564 Gm14563-201ENSMUST00000120571 354 ntBASIC7.83□□□□□ -1.16
Cux1P53564 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Cux1P53564 Gm25907-201ENSMUST00000158486 125 ntBASIC7.83□□□□□ -1.16
Cux1P53564 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Cux1P53564 Gm5244-202ENSMUST00000189517 743 ntBASIC7.83□□□□□ -1.16
Cux1P53564 Gm29781-201ENSMUST00000203862 478 ntBASIC7.83□□□□□ -1.16
Cux1P53564 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC7.83□□□□□ -1.16
Cux1P53564 AC138765.1-201ENSMUST00000228657 385 ntBASIC7.83□□□□□ -1.16
Cux1P53564 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Cux1P53564 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Cux1P53564 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Cux1P53564 AC162467.3-201ENSMUST00000219716 2172 ntBASIC7.83□□□□□ -1.16
Cux1P53564 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Cux1P53564 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Cux1P53564 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Cux1P53564 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms