Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HttP42859 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HttP42859 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HttP42859 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HttP42859 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HttP42859 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HttP42859 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HttP42859 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HttP42859 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HttP42859 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
HttP42859 Gm24689-201ENSMUST00000157760 104 ntBASIC5.22□□□□□ -1.57
HttP42859 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Gm43559-201ENSMUST00000198755 466 ntBASIC5.22□□□□□ -1.57
HttP42859 Gm4045-201ENSMUST00000204076 310 ntBASIC5.22□□□□□ -1.57
HttP42859 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.22□□□□□ -1.57
HttP42859 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC5.22□□□□□ -1.57
HttP42859 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.22□□□□□ -1.57
HttP42859 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HttP42859 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
HttP42859 Snora30-201ENSMUST00000083325 130 ntBASIC5.22□□□□□ -1.57
HttP42859 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
HttP42859 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.22□□□□□ -1.57
HttP42859 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HttP42859 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.22□□□□□ -1.57
HttP42859 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
HttP42859 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
HttP42859 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
HttP42859 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.22□□□□□ -1.57
HttP42859 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.22□□□□□ -1.57
HttP42859 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Ighv1-28-201ENSMUST00000192987 351 ntBASIC5.22□□□□□ -1.57
HttP42859 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.22□□□□□ -1.57
HttP42859 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.22□□□□□ -1.57
HttP42859 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.22□□□□□ -1.57
HttP42859 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.22□□□□□ -1.57
HttP42859 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 AC118639.1-203ENSMUST00000228425 2016 ntBASIC5.22□□□□□ -1.57
HttP42859 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.22□□□□□ -1.57
HttP42859 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
HttP42859 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.22□□□□□ -1.57
HttP42859 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HttP42859 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HttP42859 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HttP42859 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.22□□□□□ -1.57
HttP42859 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
HttP42859 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.57
HttP42859 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
HttP42859 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
HttP42859 Gm13092-201ENSMUST00000136346 260 ntBASIC5.21□□□□□ -1.57
HttP42859 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.21□□□□□ -1.57
HttP42859 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.21□□□□□ -1.57
HttP42859 Gm28195-201ENSMUST00000186992 372 ntBASIC5.21□□□□□ -1.57
HttP42859 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.21□□□□□ -1.57
HttP42859 Mir383-201ENSMUST00000083523 70 ntBASIC5.21□□□□□ -1.57
HttP42859 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.21□□□□□ -1.57
HttP42859 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.21□□□□□ -1.57
HttP42859 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
HttP42859 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HttP42859 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
HttP42859 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HttP42859 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HttP42859 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HttP42859 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HttP42859 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.21□□□□□ -1.58
HttP42859 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.21□□□□□ -1.58
HttP42859 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HttP42859 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HttP42859 Gm14802-201ENSMUST00000121944 1885 ntBASIC5.21□□□□□ -1.58
HttP42859 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.21□□□□□ -1.58
HttP42859 Gm13815-201ENSMUST00000119963 412 ntBASIC5.21□□□□□ -1.58
HttP42859 Gm25713-201ENSMUST00000158625 109 ntBASIC5.21□□□□□ -1.58
HttP42859 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.21□□□□□ -1.58
HttP42859 Gm8556-201ENSMUST00000210437 664 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms