Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28554-202ENSMUST00000189175 484 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28840-205ENSMUST00000189320 615 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29213-202ENSMUST00000189703 484 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28851-202ENSMUST00000189757 484 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28461-201ENSMUST00000190023 484 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm28835-203ENSMUST00000190062 615 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Gm2142-201ENSMUST00000197899 589 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm44003-201ENSMUST00000203024 490 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Gm18325-201ENSMUST00000203228 835 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Traf1P39428 Gm8288-201ENSMUST00000223406 593 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.27□□□□□ -1.41
Traf1P39428 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Traf1P39428 Mir449a-201ENSMUST00000083641 91 ntBASIC6.27□□□□□ -1.41
Traf1P39428 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Traf1P39428 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Traf1P39428 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Traf1P39428 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.27□□□□□ -1.41
Traf1P39428 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.26□□□□□ -1.41
Traf1P39428 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Traf1P39428 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Traf1P39428 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.26□□□□□ -1.41
Traf1P39428 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Traf1P39428 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Traf1P39428 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Traf1P39428 Lipe-203ENSMUST00000105177 1251 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 Gm15754-201ENSMUST00000119191 478 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Gm9208-201ENSMUST00000120468 948 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 Gm23964-201ENSMUST00000157966 107 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Gm22160-201ENSMUST00000158405 328 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 Gm20519-201ENSMUST00000173684 359 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Gm37882-201ENSMUST00000195254 196 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Gm43124-201ENSMUST00000201878 278 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.26□□□□□ -1.41
Traf1P39428 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.26□□□□□ -1.41
Traf1P39428 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.26□□□□□ -1.41
Traf1P39428 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.26□□□□□ -1.41
Traf1P39428 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.26□□□□□ -1.41
Traf1P39428 Gm19256-201ENSMUST00000218550 231 ntBASIC6.26□□□□□ -1.41
Traf1P39428 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Traf1P39428 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.26□□□□□ -1.41
Traf1P39428 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.26□□□□□ -1.41
Traf1P39428 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.26□□□□□ -1.41
Traf1P39428 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Traf1P39428 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Traf1P39428 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Traf1P39428 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Traf1P39428 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Traf1P39428 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC6.25□□□□□ -1.41
Traf1P39428 Mir1188-201ENSMUST00000116756 120 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.25□□□□□ -1.41
Traf1P39428 Gm14512-201ENSMUST00000117924 230 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms