Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm29284-201ENSMUST00000188363 255 ntBASIC4.66□□□□□ -1.66
P20040 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.66□□□□□ -1.66
P20040 Gm28467-201ENSMUST00000190981 318 ntBASIC4.66□□□□□ -1.66
P20040 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.66□□□□□ -1.66
P20040 Gm38384-201ENSMUST00000195413 1122 ntBASIC4.66□□□□□ -1.66
P20040 Gm4374-201ENSMUST00000204929 424 ntBASIC4.66□□□□□ -1.66
P20040 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.66□□□□□ -1.66
P20040 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.66□□□□□ -1.66
P20040 Gm45422-201ENSMUST00000211476 246 ntBASIC4.66□□□□□ -1.66
P20040 Gm6056-201ENSMUST00000221253 488 ntBASIC4.66□□□□□ -1.66
P20040 Gm36501-201ENSMUST00000221857 745 ntBASIC4.66□□□□□ -1.66
P20040 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.66□□□□□ -1.66
P20040 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.66□□□□□ -1.66
P20040 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
P20040 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
P20040 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
P20040 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
P20040 Gm25134-201ENSMUST00000082646 160 ntBASIC4.66□□□□□ -1.66
P20040 Gm23330-201ENSMUST00000082660 164 ntBASIC4.66□□□□□ -1.66
P20040 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.66□□□□□ -1.66
P20040 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
P20040 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
P20040 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC4.66□□□□□ -1.66
P20040 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
P20040 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.66□□□□□ -1.66
P20040 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.66□□□□□ -1.66
P20040 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
P20040 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.66□□□□□ -1.66
P20040 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
P20040 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.66□□□□□ -1.66
P20040 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
P20040 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
P20040 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.65□□□□□ -1.66
P20040 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
P20040 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
P20040 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.65□□□□□ -1.66
P20040 AC136019.1-201ENSMUST00000226503 1412 ntBASIC4.65□□□□□ -1.66
P20040 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
P20040 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
P20040 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
P20040 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
P20040 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
P20040 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
P20040 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
P20040 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.65□□□□□ -1.67
P20040 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.65□□□□□ -1.67
P20040 Gm14876-201ENSMUST00000120795 327 ntBASIC4.65□□□□□ -1.67
P20040 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.65□□□□□ -1.67
P20040 Gm25290-201ENSMUST00000122796 144 ntBASIC4.65□□□□□ -1.67
P20040 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.65□□□□□ -1.67
P20040 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
P20040 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Gm25430-201ENSMUST00000157614 289 ntBASIC4.65□□□□□ -1.67
P20040 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
P20040 Mir5128-201ENSMUST00000175217 84 ntBASIC4.65□□□□□ -1.67
P20040 Gm22411-201ENSMUST00000175462 126 ntBASIC4.65□□□□□ -1.67
P20040 Gm22002-201ENSMUST00000175622 125 ntBASIC4.65□□□□□ -1.67
P20040 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
P20040 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Gm20770-201ENSMUST00000193474 694 ntBASIC4.65□□□□□ -1.67
P20040 Gm18553-201ENSMUST00000194152 634 ntBASIC4.65□□□□□ -1.67
P20040 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.65□□□□□ -1.67
P20040 Gm20239-201ENSMUST00000196610 982 ntBASIC4.65□□□□□ -1.67
P20040 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.65□□□□□ -1.67
P20040 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
P20040 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.65□□□□□ -1.67
P20040 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC4.65□□□□□ -1.67
P20040 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
P20040 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.65□□□□□ -1.67
P20040 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.65□□□□□ -1.67
P20040 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
P20040 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
P20040 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
P20040 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
P20040 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
P20040 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
P20040 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
P20040 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.65□□□□□ -1.67
P20040 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.65□□□□□ -1.67
P20040 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
P20040 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.65□□□□□ -1.67
P20040 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
P20040 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
P20040 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
P20040 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.64□□□□□ -1.67
P20040 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
P20040 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
P20040 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms