Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.41□□□□□ -1.54
Lire1P11260 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.41□□□□□ -1.54
Lire1P11260 Gm43561-201ENSMUST00000199866 448 ntBASIC5.41□□□□□ -1.54
Lire1P11260 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.41□□□□□ -1.54
Lire1P11260 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.41□□□□□ -1.54
Lire1P11260 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.41□□□□□ -1.54
Lire1P11260 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Lire1P11260 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Lire1P11260 Gm7802-201ENSMUST00000216464 262 ntBASIC5.41□□□□□ -1.54
Lire1P11260 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Lire1P11260 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.41□□□□□ -1.54
Lire1P11260 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.41□□□□□ -1.54
Lire1P11260 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.41□□□□□ -1.54
Lire1P11260 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Lire1P11260 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lire1P11260 Gm25515-201ENSMUST00000083858 157 ntBASIC5.41□□□□□ -1.54
Lire1P11260 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lire1P11260 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Lire1P11260 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lire1P11260 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Lire1P11260 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Lire1P11260 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Lire1P11260 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lire1P11260 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Lire1P11260 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lire1P11260 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lire1P11260 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.41□□□□□ -1.54
Lire1P11260 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.41□□□□□ -1.54
Lire1P11260 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.41□□□□□ -1.54
Lire1P11260 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Lire1P11260 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Lire1P11260 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Lire1P11260 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lire1P11260 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Lire1P11260 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Lire1P11260 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Lire1P11260 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Lire1P11260 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Lire1P11260 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Lire1P11260 Gm25415-201ENSMUST00000104220 132 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Mir292-201ENSMUST00000104847 82 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm22194-201ENSMUST00000116869 95 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm5073-201ENSMUST00000118222 820 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.4□□□□□ -1.54
Lire1P11260 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.4□□□□□ -1.54
Lire1P11260 Gm23958-201ENSMUST00000157207 105 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm23121-201ENSMUST00000157653 173 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm24767-201ENSMUST00000158509 95 ntBASIC5.4□□□□□ -1.54
Lire1P11260 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lire1P11260 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm38080-201ENSMUST00000194035 268 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm43090-201ENSMUST00000202459 314 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC5.4□□□□□ -1.54
Lire1P11260 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.4□□□□□ -1.54
Lire1P11260 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.4□□□□□ -1.54
Lire1P11260 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.4□□□□□ -1.54
Lire1P11260 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.4□□□□□ -1.54
Lire1P11260 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Lire1P11260 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Lire1P11260 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Lire1P11260 Gm25134-201ENSMUST00000082646 160 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm22300-201ENSMUST00000082661 126 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Gm24319-201ENSMUST00000083389 107 ntBASIC5.4□□□□□ -1.54
Lire1P11260 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Lire1P11260 Gm18491-201ENSMUST00000192492 1594 ntBASIC5.4□□□□□ -1.55
Lire1P11260 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Lire1P11260 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Lire1P11260 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.4□□□□□ -1.55
Lire1P11260 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Lire1P11260 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.4□□□□□ -1.55
Lire1P11260 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Lire1P11260 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.39□□□□□ -1.55
Lire1P11260 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm12077-201ENSMUST00000117049 364 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm14294-201ENSMUST00000119749 751 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.39□□□□□ -1.55
Lire1P11260 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.39□□□□□ -1.55
Lire1P11260 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.39□□□□□ -1.55
Lire1P11260 Gm16125-201ENSMUST00000159003 339 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm24407-201ENSMUST00000177864 141 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Gm27409-201ENSMUST00000184727 80 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.39□□□□□ -1.55
Lire1P11260 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Lire1P11260 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm29815-201ENSMUST00000202418 178 ntBASIC5.39□□□□□ -1.55
Lire1P11260 Gm7832-201ENSMUST00000202613 880 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms