Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cx3cl1O35188 Gm22273-201ENSMUST00000104040 132 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm24429-201ENSMUST00000104076 132 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm25919-201ENSMUST00000104271 132 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm23593-201ENSMUST00000104309 120 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm12683-201ENSMUST00000117528 415 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm12281-201ENSMUST00000119536 298 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm11804-201ENSMUST00000121663 468 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.9□□□□□ -1.63
Cx3cl1O35188 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm11197-201ENSMUST00000145158 839 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm26350-201ENSMUST00000157531 288 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm25906-201ENSMUST00000158489 126 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Mir3110-201ENSMUST00000175053 80 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm27781-201ENSMUST00000185185 92 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm37421-201ENSMUST00000193088 132 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm9317-201ENSMUST00000197055 862 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.9□□□□□ -1.63
Cx3cl1O35188 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gm9700-201ENSMUST00000193786 1617 ntBASIC4.9□□□□□ -1.63
Cx3cl1O35188 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cx3cl1O35188 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm24235-201ENSMUST00000104319 129 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm13077-201ENSMUST00000121941 484 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm23069-201ENSMUST00000158240 311 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm4831-201ENSMUST00000174626 594 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm29664-201ENSMUST00000191125 463 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm42542-201ENSMUST00000197978 268 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm44048-201ENSMUST00000204531 361 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm17984-201ENSMUST00000205286 859 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm21041-201ENSMUST00000214829 823 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Clec2j-201ENSMUST00000032517 515 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm9386-201ENSMUST00000095195 381 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.89□□□□□ -1.63
Cx3cl1O35188 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cx3cl1O35188 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.88□□□□□ -1.63
Cx3cl1O35188 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cx3cl1O35188 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cx3cl1O35188 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cx3cl1O35188 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm9408-201ENSMUST00000197375 1505 ntBASIC4.88□□□□□ -1.63
Cx3cl1O35188 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cx3cl1O35188 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cx3cl1O35188 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm14756-201ENSMUST00000116395 240 ntBASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm7206-201ENSMUST00000117730 508 ntBASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm17014-201ENSMUST00000120765 168 ntBASIC4.88□□□□□ -1.63
Cx3cl1O35188 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm11507-201ENSMUST00000156462 412 ntBASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm23115-201ENSMUST00000158480 108 ntBASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm23207-201ENSMUST00000158665 102 ntBASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm10087-201ENSMUST00000167650 330 ntBASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.88□□□□□ -1.63
Cx3cl1O35188 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cx3cl1O35188 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms