Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm36986-201ENSMUST00000195320 353 ntBASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm2607-201ENSMUST00000212389 627 ntBASIC5.32□□□□□ -1.56
Scn1aA2APX8 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.32□□□□□ -1.56
Scn1aA2APX8 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.32□□□□□ -1.56
Scn1aA2APX8 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Scn1aA2APX8 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm25179-201ENSMUST00000122632 128 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm26153-201ENSMUST00000157433 127 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm25655-201ENSMUST00000158465 290 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm8719-201ENSMUST00000203602 534 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm5418-201ENSMUST00000206932 528 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm6906-201ENSMUST00000218014 569 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm24170-201ENSMUST00000104124 133 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm25103-201ENSMUST00000122671 318 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm23799-201ENSMUST00000175559 120 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm43524-201ENSMUST00000197278 298 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm45343-201ENSMUST00000210452 828 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm42549-201ENSMUST00000202392 7004 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.31□□□□□ -1.56
Scn1aA2APX8 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Scn1aA2APX8 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Scn1aA2APX8 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scn1aA2APX8 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Scn1aA2APX8 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Mir3062-201ENSMUST00000174986 105 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Gm9499-201ENSMUST00000180888 964 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Mir6986-201ENSMUST00000184483 58 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Gm27818-201ENSMUST00000184536 159 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Gm2950-201ENSMUST00000185530 520 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Gm28976-201ENSMUST00000188070 144 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Gm19617-201ENSMUST00000202977 308 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Gm26330-201ENSMUST00000082817 104 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Snora30-201ENSMUST00000083325 130 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scn1aA2APX8 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.3□□□□□ -1.56
Scn1aA2APX8 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Scn1aA2APX8 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms