Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm24383-201ENSMUST00000122691 333 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Esd-ps-201ENSMUST00000170684 847 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm9597-201ENSMUST00000171913 602 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.79□□□□□ -1.64
CtcflA2APF3 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm8941-201ENSMUST00000181451 899 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm27602-201ENSMUST00000183861 111 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm27219-201ENSMUST00000184633 742 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm6075-201ENSMUST00000186816 486 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm44091-201ENSMUST00000205212 649 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CtcflA2APF3 AC073947.1-201ENSMUST00000216991 649 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 AC124709.3-201ENSMUST00000227294 171 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm6195-201ENSMUST00000063059 357 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm25515-201ENSMUST00000083858 157 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CtcflA2APF3 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CtcflA2APF3 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.79□□□□□ -1.64
CtcflA2APF3 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Neat1-201ENSMUST00000173672 20771 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm15011-201ENSMUST00000117724 1480 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm22492-201ENSMUST00000157192 297 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm23149-201ENSMUST00000158837 230 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Mir6952-201ENSMUST00000185092 61 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm34768-201ENSMUST00000193884 565 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm42961-201ENSMUST00000202023 181 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm43925-201ENSMUST00000203498 206 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm7890-201ENSMUST00000204877 601 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm45485-201ENSMUST00000211229 357 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm18510-201ENSMUST00000219335 1096 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm18413-201ENSMUST00000221573 655 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm11885-201ENSMUST00000118473 1428 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.78□□□□□ -1.64
CtcflA2APF3 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CtcflA2APF3 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
CtcflA2APF3 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CtcflA2APF3 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CtcflA2APF3 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CtcflA2APF3 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CtcflA2APF3 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CtcflA2APF3 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CtcflA2APF3 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CtcflA2APF3 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.77□□□□□ -1.65
CtcflA2APF3 Mir680-1-201ENSMUST00000102257 109 ntBASIC4.77□□□□□ -1.65
CtcflA2APF3 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CtcflA2APF3 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms