Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm22420-201ENSMUST00000178795 126 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm27849-201ENSMUST00000183673 125 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm29474-201ENSMUST00000187688 379 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm35648-201ENSMUST00000202304 475 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm18587-201ENSMUST00000213736 841 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm6362-201ENSMUST00000217686 836 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm6056-201ENSMUST00000221253 488 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim3Q9R1R2 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm15754-201ENSMUST00000119191 478 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm13489-201ENSMUST00000121234 971 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm23855-201ENSMUST00000158377 135 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Mir6417-201ENSMUST00000183815 116 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Mir6412-201ENSMUST00000184477 97 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm29159-201ENSMUST00000187969 379 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm20770-201ENSMUST00000193474 694 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Mir6516-201ENSMUST00000196236 110 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm8874-201ENSMUST00000196826 286 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm43444-201ENSMUST00000198123 291 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Clec2j-202ENSMUST00000203658 606 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm20997-201ENSMUST00000205148 231 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm3257-201ENSMUST00000207217 675 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm2961-201ENSMUST00000211074 772 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm25134-201ENSMUST00000082646 160 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Gm24919-201ENSMUST00000083020 106 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Trim3Q9R1R2 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm24230-201ENSMUST00000104313 129 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm22596-201ENSMUST00000157601 316 ntBASIC5.01□□□□□ -1.61
Trim3Q9R1R2 Gm24216-201ENSMUST00000158259 117 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms