Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lima1Q9ERG0 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm14485-201ENSMUST00000119489 493 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm15057-201ENSMUST00000121516 534 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm25290-201ENSMUST00000122796 144 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Mir1970-201ENSMUST00000157839 104 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm26489-201ENSMUST00000157880 264 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm27602-201ENSMUST00000183861 111 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm2914-201ENSMUST00000186120 328 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm37445-201ENSMUST00000195318 242 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Mir409-201ENSMUST00000198153 79 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm19195-201ENSMUST00000222018 511 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.05□□□□□ -1.6
Lima1Q9ERG0 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Mir6417-201ENSMUST00000183815 116 ntBASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Gm18969-201ENSMUST00000189423 730 ntBASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Mir6906-201ENSMUST00000198998 58 ntBASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Gm44623-201ENSMUST00000207934 434 ntBASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Mir331-201ENSMUST00000083673 96 ntBASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.04□□□□□ -1.6
Lima1Q9ERG0 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Lima1Q9ERG0 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm12641-201ENSMUST00000117874 985 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm12332-201ENSMUST00000121397 922 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm7973-201ENSMUST00000122107 488 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm24944-201ENSMUST00000158330 128 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Gm25907-201ENSMUST00000158486 125 ntBASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lima1Q9ERG0 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms