Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm29755-201ENSMUST00000196976 948 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm2011-203ENSMUST00000203750 435 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm7825-201ENSMUST00000204046 416 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm5735-201ENSMUST00000207053 167 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm19174-201ENSMUST00000216944 956 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Smc1aQ9CU62 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Smc1aQ9CU62 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm37776-201ENSMUST00000193471 2497 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC6□□□□□ -1.45
Smc1aQ9CU62 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm13681-201ENSMUST00000117925 210 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm15490-201ENSMUST00000119894 387 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm5405-201ENSMUST00000120478 609 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm6027-201ENSMUST00000121467 756 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm12267-201ENSMUST00000121609 761 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm12685-201ENSMUST00000121702 214 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm38040-201ENSMUST00000193505 225 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm5284-201ENSMUST00000199053 903 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm45690-201ENSMUST00000210775 246 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Smc1aQ9CU62 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm24789-201ENSMUST00000104282 131 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm15766-201ENSMUST00000118025 813 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm23806-201ENSMUST00000175157 109 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm22254-201ENSMUST00000179186 110 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm43078-201ENSMUST00000197222 168 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm17984-201ENSMUST00000205286 859 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm7990-201ENSMUST00000212126 593 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm20786-201ENSMUST00000212649 436 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 AC142113.2-201ENSMUST00000217425 748 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm19256-201ENSMUST00000218550 231 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Gm40692-201ENSMUST00000220411 491 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Thoc7-209ENSMUST00000225325 765 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.98□□□□□ -1.45
Smc1aQ9CU62 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms