Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC158388.2-201ENSMUST00000223665 1314 ntBASIC4.95□□□□□ -1.62
Use1Q9CQ56 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm23593-201ENSMUST00000104309 120 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm22804-201ENSMUST00000158052 101 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm38181-201ENSMUST00000181357 720 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm27887-201ENSMUST00000184367 102 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm412-201ENSMUST00000193360 948 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm37030-201ENSMUST00000194254 295 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm37659-201ENSMUST00000194574 111 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm44360-201ENSMUST00000200081 82 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm33178-201ENSMUST00000212090 257 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm19073-201ENSMUST00000219978 555 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 AC160980.2-201ENSMUST00000225131 949 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.94□□□□□ -1.62
Use1Q9CQ56 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
Use1Q9CQ56 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm12245-201ENSMUST00000117266 357 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm11737-201ENSMUST00000118713 468 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm12482-201ENSMUST00000120435 630 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm5383-201ENSMUST00000121177 617 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm23211-201ENSMUST00000122717 308 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm24435-201ENSMUST00000157886 110 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm25459-201ENSMUST00000157953 114 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm25445-201ENSMUST00000158996 299 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm17152-201ENSMUST00000172430 535 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm27460-201ENSMUST00000184213 100 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm2914-201ENSMUST00000186120 328 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm37517-201ENSMUST00000194004 1289 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm42522-201ENSMUST00000196071 255 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm42458-201ENSMUST00000201914 369 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm18009-201ENSMUST00000203239 1016 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm3257-201ENSMUST00000207217 675 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm16335-201ENSMUST00000077495 309 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Gm23508-201ENSMUST00000083079 72 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.93□□□□□ -1.62
Use1Q9CQ56 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Use1Q9CQ56 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Use1Q9CQ56 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm25246-201ENSMUST00000175476 69 ntBASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms