Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC123061.2-201ENSMUST00000226234 802 ntBASIC7.18□□□□□ -1.26
Trim11Q99PQ2 AC132317.2-201ENSMUST00000227301 519 ntBASIC7.18□□□□□ -1.26
Trim11Q99PQ2 AC101205.1-201ENSMUST00000227916 907 ntBASIC7.18□□□□□ -1.26
Trim11Q99PQ2 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim11Q99PQ2 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim11Q99PQ2 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC7.18□□□□□ -1.26
Trim11Q99PQ2 Mir465c-1-201ENSMUST00000093560 81 ntBASIC7.18□□□□□ -1.26
Trim11Q99PQ2 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Trim11Q99PQ2 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim11Q99PQ2 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim11Q99PQ2 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim11Q99PQ2 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim11Q99PQ2 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Trim11Q99PQ2 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm44667-201ENSMUST00000207632 3337 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm43180-201ENSMUST00000197541 2886 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm23979-201ENSMUST00000104071 128 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm11692-201ENSMUST00000122121 902 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm23343-201ENSMUST00000158964 143 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm16236-201ENSMUST00000159588 379 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm18560-201ENSMUST00000173463 1123 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm5871-201ENSMUST00000176461 718 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm25397-201ENSMUST00000176951 92 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm36953-201ENSMUST00000195295 268 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm5027-201ENSMUST00000206700 375 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 AC151730.2-201ENSMUST00000224027 475 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 CU062626.1-201ENSMUST00000225248 505 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 AC102291.1-201ENSMUST00000227164 529 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm10205-201ENSMUST00000087431 234 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim11Q99PQ2 Gm7739-201ENSMUST00000221131 1560 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 AC154511.1-201ENSMUST00000222578 1587 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm20300-201ENSMUST00000214634 3440 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 AC115891.1-201ENSMUST00000215798 1755 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm9427-201ENSMUST00000116187 651 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm12370-201ENSMUST00000117809 604 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm14899-201ENSMUST00000118673 548 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm12654-201ENSMUST00000120387 587 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm13865-201ENSMUST00000120957 865 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm7746-201ENSMUST00000120966 503 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm3757-201ENSMUST00000125878 675 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm16330-201ENSMUST00000128324 297 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm17154-201ENSMUST00000165748 431 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm8358-201ENSMUST00000167222 555 ntBASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
Trim11Q99PQ2 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms