Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdh23Q99PF4 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdh23Q99PF4 Gm23860-201ENSMUST00000179446 132 ntBASIC5.01□□□□□ -1.61
Cdh23Q99PF4 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdh23Q99PF4 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdh23Q99PF4 Gm44648-201ENSMUST00000208267 329 ntBASIC5.01□□□□□ -1.61
Cdh23Q99PF4 Gm5338-201ENSMUST00000209530 639 ntBASIC5.01□□□□□ -1.61
Cdh23Q99PF4 Gm32526-201ENSMUST00000221878 981 ntBASIC5.01□□□□□ -1.61
Cdh23Q99PF4 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.01□□□□□ -1.61
Cdh23Q99PF4 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdh23Q99PF4 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdh23Q99PF4 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdh23Q99PF4 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.01□□□□□ -1.61
Cdh23Q99PF4 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm37914-201ENSMUST00000195317 2679 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm42994-201ENSMUST00000195964 2549 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm45183-201ENSMUST00000207937 1497 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm22269-201ENSMUST00000104002 130 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm12486-201ENSMUST00000120887 541 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm12026-201ENSMUST00000120961 1024 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm6031-201ENSMUST00000121314 1054 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm6546-201ENSMUST00000192096 766 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm2147-201ENSMUST00000193588 639 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm45857-201ENSMUST00000212207 356 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm7822-201ENSMUST00000222433 581 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 AC098742.1-201ENSMUST00000227945 373 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm18186-201ENSMUST00000192239 1580 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm45311-201ENSMUST00000211086 1330 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm42630-201ENSMUST00000195908 3448 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm3931-201ENSMUST00000119038 455 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm8051-201ENSMUST00000120464 466 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5□□□□□ -1.61
Cdh23Q99PF4 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm42999-201ENSMUST00000198049 786 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5□□□□□ -1.61
Cdh23Q99PF4 AC154371.1-201ENSMUST00000226600 412 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 CT009600.2-201ENSMUST00000226638 481 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm25260-201ENSMUST00000083053 134 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Cdh23Q99PF4 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm37183-201ENSMUST00000191712 3405 ntBASIC5□□□□□ -1.61
Cdh23Q99PF4 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Gm14998-201ENSMUST00000120502 495 ntBASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Gm23865-201ENSMUST00000157723 97 ntBASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Gm24520-201ENSMUST00000179510 110 ntBASIC4.99□□□□□ -1.61
Cdh23Q99PF4 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Desi2-202ENSMUST00000069568 1193 ntBASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.99□□□□□ -1.61
Cdh23Q99PF4 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms