Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm11483-201ENSMUST00000119839 247 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm14620-201ENSMUST00000120656 383 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.63□□□□□ -1.51
Usp11Q99K46 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.63□□□□□ -1.51
Usp11Q99K46 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm3216-201ENSMUST00000166927 486 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm3141-201ENSMUST00000168726 499 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm44370-201ENSMUST00000175436 112 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp11Q99K46 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm29376-201ENSMUST00000189357 835 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm44221-201ENSMUST00000203552 388 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm45026-201ENSMUST00000205292 833 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm19921-201ENSMUST00000210505 703 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm9202-201ENSMUST00000223036 437 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Usp11Q99K46 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Mir331-201ENSMUST00000083673 96 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm20541-201ENSMUST00000173035 1406 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp11Q99K46 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.63□□□□□ -1.51
Usp11Q99K46 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp11Q99K46 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Usp11Q99K46 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp11Q99K46 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp11Q99K46 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm25317-201ENSMUST00000116824 129 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm12303-201ENSMUST00000119506 673 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm13259-201ENSMUST00000120792 456 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm12267-201ENSMUST00000121609 761 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm15274-201ENSMUST00000131442 291 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm21979-201ENSMUST00000139887 291 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm15259-201ENSMUST00000151262 291 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Usp11Q99K46 Mir7008-201ENSMUST00000184398 63 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm27409-201ENSMUST00000184727 80 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm29201-201ENSMUST00000189120 431 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm37966-201ENSMUST00000193122 326 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm37533-201ENSMUST00000193848 545 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm18553-201ENSMUST00000194152 634 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.62□□□□□ -1.51
Usp11Q99K46 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm43054-201ENSMUST00000199495 884 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm44539-201ENSMUST00000206010 238 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.62□□□□□ -1.51
Usp11Q99K46 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.62□□□□□ -1.51
Usp11Q99K46 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp11Q99K46 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp11Q99K46 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC5.62□□□□□ -1.51
Usp11Q99K46 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.62□□□□□ -1.51
Usp11Q99K46 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Usp11Q99K46 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Usp11Q99K46 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp11Q99K46 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms