Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm29376-201ENSMUST00000189357 835 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm37934-201ENSMUST00000192902 402 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm45026-201ENSMUST00000205292 833 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm17911-201ENSMUST00000210806 877 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 AL929265.1-201ENSMUST00000213427 125 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 AC153932.1-201ENSMUST00000218558 787 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 AC140368.1-202ENSMUST00000226131 658 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 AC156574.2-201ENSMUST00000228023 282 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.6□□□□□ -1.35
Brf1Q8CFK2 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm14925-201ENSMUST00000120611 438 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm14732-201ENSMUST00000121372 545 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm24002-201ENSMUST00000158456 104 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm17511-201ENSMUST00000172206 342 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm44988-201ENSMUST00000203835 1161 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm2926-201ENSMUST00000205625 239 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm18598-201ENSMUST00000207724 597 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm2961-201ENSMUST00000211074 772 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm45789-201ENSMUST00000213038 364 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm25739-201ENSMUST00000082886 107 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 AW046200-203ENSMUST00000211787 2479 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.59□□□□□ -1.35
Brf1Q8CFK2 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.59□□□□□ -1.36
Brf1Q8CFK2 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Brf1Q8CFK2 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.59□□□□□ -1.36
Brf1Q8CFK2 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm45263-201ENSMUST00000210377 1375 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm14756-201ENSMUST00000116395 240 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm12584-201ENSMUST00000117109 1105 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm14220-201ENSMUST00000118114 449 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm12936-201ENSMUST00000121439 301 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm25557-201ENSMUST00000158084 315 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm23225-201ENSMUST00000158121 114 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm24395-201ENSMUST00000158139 125 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm20519-201ENSMUST00000173684 359 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm29525-201ENSMUST00000189844 699 ntBASIC6.58□□□□□ -1.36
Brf1Q8CFK2 Gm29523-201ENSMUST00000191415 699 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms