Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.24□□□□□ -1.41
Nup88Q8CEC0 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.24□□□□□ -1.41
Nup88Q8CEC0 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.24□□□□□ -1.41
Nup88Q8CEC0 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.24□□□□□ -1.41
Nup88Q8CEC0 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Nup88Q8CEC0 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nup88Q8CEC0 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Nup88Q8CEC0 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nup88Q8CEC0 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Nup88Q8CEC0 Gm44624-201ENSMUST00000208700 2278 ntBASIC6.24□□□□□ -1.41
Nup88Q8CEC0 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.24□□□□□ -1.41
Nup88Q8CEC0 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nup88Q8CEC0 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nup88Q8CEC0 Gm6503-201ENSMUST00000210829 2225 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Snord65-201ENSMUST00000104269 72 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm7670-201ENSMUST00000121272 641 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm7281-201ENSMUST00000160010 543 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm3170-201ENSMUST00000168753 850 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm4831-201ENSMUST00000174626 594 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm3348-201ENSMUST00000177813 850 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Mir7087-201ENSMUST00000184840 70 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm44330-201ENSMUST00000200106 143 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm8719-201ENSMUST00000203602 534 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm17984-201ENSMUST00000205286 859 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm44603-201ENSMUST00000206820 367 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm7588-201ENSMUST00000216866 571 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Mir449a-201ENSMUST00000083641 91 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm25187-201ENSMUST00000083906 133 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm25099-201ENSMUST00000093716 116 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 AC144772.1-201ENSMUST00000226372 2398 ntBASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Nup88Q8CEC0 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Mir292-201ENSMUST00000104847 82 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm3931-201ENSMUST00000119038 455 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm14175-201ENSMUST00000119835 241 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm16179-201ENSMUST00000120685 373 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm11805-201ENSMUST00000121238 600 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm14369-201ENSMUST00000121355 285 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm15152-201ENSMUST00000121540 394 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm23546-201ENSMUST00000158211 137 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm22917-201ENSMUST00000180116 110 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm27754-201ENSMUST00000183340 126 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm19104-201ENSMUST00000198392 679 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm18215-201ENSMUST00000204429 798 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm45660-201ENSMUST00000210267 151 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm3213-201ENSMUST00000219296 441 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Desi2-202ENSMUST00000069568 1193 ntBASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Nup88Q8CEC0 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms