Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Atg4aQ8C9S8 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Atg4aQ8C9S8 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
Atg4aQ8C9S8 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm13887-201ENSMUST00000119009 344 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm25824-201ENSMUST00000157092 121 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm26404-201ENSMUST00000158498 109 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm9294-201ENSMUST00000165198 789 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm16456-201ENSMUST00000174431 920 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm5139-201ENSMUST00000175943 249 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Mir6416-201ENSMUST00000183664 117 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Mir7037-201ENSMUST00000184414 65 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm9134-201ENSMUST00000193186 551 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm43116-201ENSMUST00000199789 195 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm43093-201ENSMUST00000202439 1213 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm18904-201ENSMUST00000218756 329 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 AC241593.2-201ENSMUST00000225099 510 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 AC161269.1-201ENSMUST00000228426 318 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm29488-201ENSMUST00000191427 2402 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Atg4aQ8C9S8 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm25418-201ENSMUST00000104214 129 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm9429-201ENSMUST00000117804 868 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm7973-201ENSMUST00000122107 488 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Mir5110-201ENSMUST00000175537 87 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm3307-201ENSMUST00000176164 632 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Mir6343-201ENSMUST00000183584 84 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Gm20368-201ENSMUST00000220716 301 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 CT009600.2-201ENSMUST00000226638 481 ntBASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Atg4aQ8C9S8 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm26490-201ENSMUST00000157879 140 ntBASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm26731-201ENSMUST00000180683 543 ntBASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm9038-201ENSMUST00000203400 604 ntBASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 CT025523.1-201ENSMUST00000228318 694 ntBASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Clec2j-201ENSMUST00000032517 515 ntBASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 n-R5s170-201ENSMUST00000083726 113 ntBASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Atg4aQ8C9S8 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms