Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm10221-201ENSMUST00000088299 309 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm12267-201ENSMUST00000121609 761 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm22210-201ENSMUST00000158101 144 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm8582-201ENSMUST00000164061 789 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm18529-201ENSMUST00000193025 1257 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm18843-201ENSMUST00000194982 719 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm4742-201ENSMUST00000200261 771 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm42643-201ENSMUST00000200504 279 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Snora44-201ENSMUST00000082670 129 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm23302-201ENSMUST00000082710 100 ntBASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc40Q8BI79 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm14874-201ENSMUST00000118995 438 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm15754-201ENSMUST00000119191 478 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm12482-201ENSMUST00000120435 630 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm23662-201ENSMUST00000158046 111 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm26354-201ENSMUST00000158221 129 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm16566-201ENSMUST00000160387 910 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm21909-201ENSMUST00000178260 439 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm27855-201ENSMUST00000184122 128 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm21617-201ENSMUST00000188297 691 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm37503-201ENSMUST00000192088 319 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm4374-201ENSMUST00000204929 424 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Mir298-201ENSMUST00000083476 82 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc40Q8BI79 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.59□□□□□ -1.52
Ccdc40Q8BI79 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Ccdc40Q8BI79 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ccdc40Q8BI79 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms