Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm13310-201ENSMUST00000120962 1381 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm11517-201ENSMUST00000119491 387 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm13808-201ENSMUST00000121353 184 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm12222-201ENSMUST00000121368 260 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm7309-201ENSMUST00000121670 581 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm15534-201ENSMUST00000137642 562 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm23756-201ENSMUST00000157582 114 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm24422-201ENSMUST00000157800 119 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm17154-201ENSMUST00000165748 431 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm2229-201ENSMUST00000193328 710 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm37526-201ENSMUST00000194640 619 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm43459-201ENSMUST00000202093 331 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm5001-201ENSMUST00000204361 331 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm5318-201ENSMUST00000205249 406 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 AC151843.1-201ENSMUST00000215960 691 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm5928-201ENSMUST00000221839 466 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Rny3-201ENSMUST00000083011 102 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.06□□□□□ -1.44
Scaf4Q6PFF0 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm3675-201ENSMUST00000175904 1653 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm12573-201ENSMUST00000118158 286 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm12985-201ENSMUST00000118376 183 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm13818-201ENSMUST00000119441 511 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm14887-201ENSMUST00000119522 663 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm12174-201ENSMUST00000119853 813 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm12929-201ENSMUST00000122406 370 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm23883-201ENSMUST00000122686 290 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm23077-201ENSMUST00000157854 116 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Mir1981-201ENSMUST00000157934 82 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Mir5617-201ENSMUST00000176786 57 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm4845-201ENSMUST00000179202 562 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm27539-201ENSMUST00000184971 224 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 Gm8367-201ENSMUST00000186145 887 ntBASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scaf4Q6PFF0 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms