Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm25474-201ENSMUST00000179052 94 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm22047-201ENSMUST00000179176 94 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm28116-201ENSMUST00000189064 387 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm29160-201ENSMUST00000190094 699 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm37358-201ENSMUST00000195492 479 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Mir6994-201ENSMUST00000198985 73 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 AC164567.4-201ENSMUST00000219708 483 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 AC122327.2-201ENSMUST00000220883 120 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 CT025616.1-201ENSMUST00000221158 412 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 AC122327.3-201ENSMUST00000221852 120 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 AC166341.1-201ENSMUST00000223360 105 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Olfr512-201ENSMUST00000074730 1056 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm37653-201ENSMUST00000195401 3578 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm10555-201ENSMUST00000193178 1791 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm43769-201ENSMUST00000201871 4323 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm37372-201ENSMUST00000193577 3311 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm24888-201ENSMUST00000104387 130 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm11105-201ENSMUST00000112781 478 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm8855-201ENSMUST00000118888 878 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm12935-201ENSMUST00000119352 246 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm14972-201ENSMUST00000121780 364 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm11787-201ENSMUST00000121996 1050 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm26312-201ENSMUST00000157769 165 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm21772-201ENSMUST00000169213 478 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm17126-201ENSMUST00000172276 523 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm25598-201ENSMUST00000179031 107 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm4742-201ENSMUST00000200261 771 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 AC164424.1-201ENSMUST00000221690 170 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 AV026068-216ENSMUST00000223874 328 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm28583-201ENSMUST00000188903 2141 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm43581-201ENSMUST00000196766 2864 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Dennd6a-203ENSMUST00000224111 2692 ntBASIC11.63□□□□□ -0.55
Trim41Q5NCC3 Gm18186-201ENSMUST00000192239 1580 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm43662-201ENSMUST00000198310 2271 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm42898-201ENSMUST00000200370 3073 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm23910-201ENSMUST00000104597 132 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm15087-201ENSMUST00000117465 1172 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm12515-201ENSMUST00000120116 361 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm11504-201ENSMUST00000120211 173 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm26970-201ENSMUST00000182990 964 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm8296-201ENSMUST00000185597 524 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm37135-201ENSMUST00000192652 534 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm43039-201ENSMUST00000202883 963 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm44254-201ENSMUST00000204184 322 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm45232-201ENSMUST00000207811 162 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Olfr1309-201ENSMUST00000207885 964 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 CT485607.3-201ENSMUST00000213361 672 ntBASIC11.62□□□□□ -0.55
Trim41Q5NCC3 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim41Q5NCC3 AC174797.3-202ENSMUST00000224578 587 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms